RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	CCP110	O43303	1012 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ZNF749	O43361	778 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	MTX2	O75431	263 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	LSM8	O95777	96 aa	Known RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	TRBC1	P01850	177 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	CBSL	P0DN79	551 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ERCC2	P18074	760 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	CDH3	P22223	829 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	DNAJA1	P31689	397 aa	Known RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	CBS	P35520	551 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PREP	P48147	710 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	KRT85	P78386	507 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	RBPJ	Q06330	500 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ADCY2	Q08462	1091 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PKP1	Q13835	747 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	C3AR1	Q16581	482 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ZFYVE27	Q5T4F4	411 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PRAMEF13	Q5VWM6	474 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ALS2CL	Q60I27	953 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ZNF324B	Q6AW86	544 aa	Predicted RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	IGFL2	Q6UWQ7	119 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ADGRG6	Q86SQ4	1221 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	LRRTM4	Q86VH4	590 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	BBS5	Q8N3I7	341 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	NPW	Q8N729	165 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PTER	Q96BW5	349 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	TAAR6	Q96RI8	345 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	NDC1	Q9BTX1	674 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	SPATA16	Q9BXB7	569 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	DHX35	Q9H5Z1	703 aa	Known RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	TRIM39	Q9HCM9	518 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	SLC6A20	Q9NP91	592 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	SIX2	Q9NPC8	291 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	IFT80	Q9P2H3	777 aa	Predicted RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	NDOR1	Q9UHB4	597 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	SERTAD3	Q9UJW9	196 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PSMD13	Q9UNM6	376 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	CHKB	Q9Y259	395 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PPIL1	Q9Y3C6	166 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ADGRG1	Q9Y653	693 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	MDC1	Q14676	2089 aa	Known RBP	6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PIKFYVE	Q9Y2I7	2098 aa		6.99	□□□□□ -1.29
HDLBP-222	ENST00000449504	PKDREJ	Q9NTG1	2253 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	NIPBL	Q6KC79	2804 aa	eCLIP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	C1orf232	A0A0U1RR37	186 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	CCDC66	A2RUB6	948 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504		E7EQ34	232 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	AGPS	O00116	658 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	POLR2C	P19387	275 aa	Predicted RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	AGA	P20933	346 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	MMP8	P22894	467 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	MST1	P26927	711 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	HSPA9	P38646	679 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	SPINT3	P49223	89 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	KPNA2	P52292	529 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	ARG2	P78540	354 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	RPE65	Q16518	533 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	CA9	Q16790	459 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	ZNF789	Q5FWF6	425 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	HENMT1	Q5T8I9	393 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	AGAP9	Q5VTM2	703 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	RPUSD3	Q6P087	351 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	OOSP2	Q86WS3	158 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	OR2Y1	Q8NGV0	311 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	NSMCE1	Q8WV22	266 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	THOC3	Q96J01	351 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	ZNF599	Q96NL3	588 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	SMR3A	Q99954	134 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	C17orf62	Q9BQA9	187 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	DPH2	Q9BQC3	489 aa	Predicted RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	MGME1	Q9BQP7	344 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	TMEM121	Q9BTD3	319 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	KLHL25	Q9H0H3	589 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	ENKD1	Q9H0I2	346 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	NT5M	Q9NPB1	228 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	IMP3	Q9NV31	184 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	PLA2G3	Q9NZ20	509 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	PKD2L2	Q9NZM6	624 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	TINAG	Q9UJW2	476 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	FBXL4	Q9UKA2	621 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	AP4E1	Q9UPM8	1137 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	CDYL	Q9Y232	598 aa		6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	CFAP20	Q9Y6A4	193 aa	Known RBP	6.98	□□□□□ -1.29
HDLBP-222	ENST00000449504	MYO7B	Q6PIF6	2116 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	ANKRD62	A6NC57	917 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	CHUK	O15111	745 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	MAP3K7	O43318	606 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	FZD6	O60353	706 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	SLC19A2	O60779	497 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	CNOT3	O75175	753 aa	Known RBP	6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	KLHL18	O94889	574 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	CDK14	O94921	469 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	FGFR1OP	O95684	399 aa	Known RBP	6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	F10	P00742	488 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	HSP90AA1	P07900	732 aa	Known RBP	6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	UMOD	P07911	640 aa		6.97	□□□□□ -1.29
HDLBP-222	ENST00000449504	HBQ1	P09105	142 aa		6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms