RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C1QTNF3-AMACRE9PGA6 284 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 GPC4O75487 556 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 SKAP2O75563 359 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 CRCPO75575 148 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 CDK14O94921 469 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 SIX3O95343 332 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 ATP6V1G2O95670 118 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 LMNAP02545 664 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 FTH1P02794 183 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 ELFN1P0C7U0 828 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 ATP1B2P14415 290 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PSMC3P17980 439 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 AKT1P31749 480 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 HNRNPH1P31943 449 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PGM1P36871 562 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 MMP12P39900 470 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PKNOX1P55347 436 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 SEMG2Q02383 582 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 COL19A1Q14993 1142 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PCBP2Q15366 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 MAPRE2Q15555 327 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 CDKL4Q5MAI5 379 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 LDLRAP1Q5SW96 308 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 C6orf163Q5TEZ5 329 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 TTC23LQ6PF05 361 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 SERPINA13PQ6UXR4 307 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 CLDN19Q8N6F1 224 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PDPRQ8NCN5 879 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF483Q8TF39 744 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 SUSD6Q92537 303 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 UTP4Q969X6 686 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 NXPE3Q969Y0 559 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 VPS35Q96QK1 796 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 MIPEPQ99797 713 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 RTKNQ9BST9 563 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 RDH14Q9HBH5 336 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 NDE1Q9NXR1 346 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 BAIAP2L1Q9UHR4 511 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 FIS1Q9Y3D6 152 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 PRSS21Q9Y6M0 314 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 BPTFQ12830 3046 aa10.41□□□□□ -0.74
VIPAS39-203ENST00000448935 TMEM233B4DJY2 109 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 UBFD1O14562 309 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 NPC1O15118 1278 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 FFAR2O15552 330 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ESRRBO95718 433 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ENO2P09104 434 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 MPC1LP0DKB6 136 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 COX4I1P13073 169 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 VCLP18206 1134 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ITGB6P18564 788 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 MSH3P20585 1137 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 MTHFRP42898 656 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 CDH13P55290 713 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 SH3BP2P78314 561 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 TAGLNQ01995 201 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 RALGDSQ12967 914 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 SQLEQ14534 574 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF234Q14588 700 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 LRRC73Q5JTD7 316 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PLEKHS1Q5SXH7 462 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 C9orf64Q5T6V5 341 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 HENMT1Q5T8I9 393 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 KANK2Q63ZY3 851 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 SULT1C3Q6IMI6 304 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 FBXL19Q6PCT2 694 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 SBSNQ6UWP8 590 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 LIPIQ6XZB0 460 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF765Q7L2R6 523 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 CYP2U1Q7Z449 544 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 HSD11B1LQ7Z5J1 315 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 RBM15BQ8NDT2 890 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 FAM13CQ8NE31 585 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 DDHD1Q8NEL9 900 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PIP4K2CQ8TBX8 421 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 MAGEC3Q8TD91 643 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 TRPC4APQ8TEL6 797 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 AGAP11Q8TF27 550 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 RAB7BQ96AH8 199 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 C19orf60Q96EN9 201 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PPP1R36Q96LQ0 422 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 HGH1Q9BTY7 390 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 TRIM54Q9BYV2 358 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 TMEM245Q9H330 911 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF385DQ9H6B1 395 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 LMCD1Q9NZU5 365 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PCTPQ9UKL6 214 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 IKZF3Q9UKT9 509 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PPM1HQ9ULR3 514 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 PIKFYVEQ9Y2I7 2098 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 DENND4AQ7Z401 1863 aa10.4□□□□□ -0.74
VIPAS39-203ENST00000448935 NCF1BA6NI72 391 aaPredicted RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 NCF1CA8MVU1 366 aaPredicted RBP10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 WNT9AO14904 365 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 UBDO15205 165 aa10.4□□□□□ -0.75
VIPAS39-203ENST00000448935 CIB2O75838 187 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms