RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 LINC00615Q96LM1 132 aaPredicted RBP11.64□□□□□ -0.55
RCL1-208ENST00000448872 TIMM29Q9BSF4 260 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 DHRS4Q9BTZ2 278 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 OSGEPL1Q9H4B0 414 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 RHOJQ9H4E5 214 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 CAB39LQ9H9S4 337 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 PRDM8Q9NQV8 689 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 SPATS2LQ9NUQ6 558 aaKnown RBP11.64□□□□□ -0.55
RCL1-208ENST00000448872 TRNAU1APQ9NX07 287 aaKnown RBP11.64□□□□□ -0.55
RCL1-208ENST00000448872 NSMCE4AQ9NXX6 385 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 TXNDC16Q9P2K2 825 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 SPASTQ9UBP0 616 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 TBC1D29Q9UFV1 150 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
RCL1-208ENST00000448872 WDR37Q9Y2I8 494 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 PCDHB1Q9Y5F3 818 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 LRRK1Q38SD2 2015 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 SDK1Q7Z5N4 2213 aa11.64□□□□□ -0.55
RCL1-208ENST00000448872 FAM95CA0A1B0GW59 222 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 MGAT4DA6NG13 374 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 PRR19A6NJB7 356 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 YY2O15391 372 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 LRP3O75074 770 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 FTH1P02794 183 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 GIMD1P0DJR0 217 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 MYF5P13349 255 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 RPL10P27635 214 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 PDHA2P29803 388 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 GMPRP36959 345 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CCT8P50990 548 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CLCN7P51798 805 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 LIMK2P53671 638 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 ILF3Q12906 894 aaKnown RBP eCLIP11.63□□□□□ -0.55
RCL1-208ENST00000448872 NAB1Q13506 487 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 BOP1Q14137 746 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 ZNF460Q14592 562 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 GRTP1Q5TC63 336 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 MROH9Q5TGP6 573 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 VRK3Q8IV63 474 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CEP97Q8IW35 865 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 EPS8L3Q8TE67 593 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 GPR21Q99679 349 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CCDC68Q9H2F9 335 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 COG4Q9H9E3 785 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 SCHIP1Q9P0W5 487 aaPredicted RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 TAAR2Q9P1P5 351 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CTNNAL1Q9UBT7 734 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 PSMD13Q9UNM6 376 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 THADAQ6YHU6 1953 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 TRBV23OR9-2A0A075B6M9 112 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 FOXO6A8MYZ6 492 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 E5RI56 91 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 TRIM38O00635 465 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 ERLIN1O75477 346 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 INHBAP08476 426 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 ITGA2BP08514 1039 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 H2AFXP16104 143 aaPredicted RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 FDXRP22570 491 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 AOAHP28039 575 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 MSH2P43246 934 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 TAS2R39P59534 338 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 HSPA14Q0VDF9 509 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 LRP8Q14114 963 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 ELOCQ15369 112 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 FAM46DQ8NEK8 389 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CD200R1Q8TD46 325 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 PATE1Q8WXA2 126 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 GSDMCQ9BYG8 508 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 DNAAF2Q9NVR5 837 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 SLC39A10Q9ULF5 831 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 CDYLQ9Y232 598 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 PLAAQ9Y263 795 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 BTBD3Q9Y2F9 522 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 VWA7Q9Y334 891 aa11.63□□□□□ -0.55
RCL1-208ENST00000448872 DNMT3AQ9Y6K1 912 aaPredicted RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
RCL1-208ENST00000448872 ZFHX2Q9C0A1 2572 aaPredicted RBP11.62□□□□□ -0.55
RCL1-208ENST00000448872 PRAMEF33A0A0G2JMD5 474 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 C17orf113A0A1B0GUU1 675 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 SLC5A10A0PJK1 596 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 A6NCN8 305 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 C4orf47A7E2U8 309 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 PDZK1P1A8MUH7 402 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 B4DGG1 531 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 LMO7DNF2Z398 122 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 H3BMM5 538 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 QSOX1O00391 747 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 PHGDHO43175 533 aaKnown RBP11.62□□□□□ -0.55
RCL1-208ENST00000448872 DFNA5O60443 496 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 GFRA3O60609 400 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 NUDT17P0C025 328 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 BRAFP15056 766 aa11.62□□□□□ -0.55
RCL1-208ENST00000448872 SPRP35270 261 aaPredicted RBP11.62□□□□□ -0.55
RCL1-208ENST00000448872 DMPKQ09013 629 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms