RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 PHC3Q8NDX5 983 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 LKAAEAR1Q8TD35 194 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 PEX13Q92968 403 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 CXorf40BQ96DE9 158 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 SGSM3Q96HU1 749 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 LINC00615Q96LM1 132 aaPredicted RBP13.1□□□□□ -0.31
SNHG4-201ENST00000448190 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
SNHG4-201ENST00000448190 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
SNHG4-201ENST00000448190 KCNK4Q9NYG8 393 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 MSRB2Q9Y3D2 182 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
SNHG4-201ENST00000448190 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 OR5K4A6NMS3 321 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 NTN3O00634 580 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 SLC2A4P14672 509 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 TYRP1P17643 537 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PGAM1P18669 254 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 XRCC1P18887 633 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PAMP19021 973 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PPARGP37231 505 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 HALP42357 657 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 TTPAP49638 278 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PLTPP55058 493 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 EIF3BP55884 814 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ARL4CP56559 192 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 UBE2IP63279 158 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 SHC2P98077 582 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 CFHR1Q03591 330 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PDIA2Q13087 525 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 HSP90AA5PQ58FG0 334 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 AARS2Q5JTZ9 985 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 AGAP9Q5VTM2 703 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 KIAA0930Q6ICG6 404 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 FOXR1Q6PIV2 292 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 WASH2PQ6VEQ5 465 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ZNF438Q7Z4V0 828 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 DENND6AQ8IWF6 608 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 DCBLD1Q8N8Z6 715 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ELMO1Q92556 727 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 FAM136AQ96C01 138 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ATXN7L3BQ96GX2 97 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 NRTNQ99748 197 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 SARS2Q9NP81 518 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 WASH6PQ9NQA3 447 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 FBXO6Q9NRD1 293 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 ACSL5Q9ULC5 683 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 CHMP2BQ9UQN3 213 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 CRYL1Q9Y2S2 319 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
SNHG4-201ENST00000448190 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
SNHG4-201ENST00000448190 IGHV1OR21-1A0A087WYE8 117 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 PMS2P1A4D2B8 440 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 FAM221BA6H8Z2 402 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 C1QTNF9BB2RNN3 333 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 USP1O94782 785 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 S1PR4O95977 384 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 TUBB4AP04350 444 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 SLC35G4P0C7Q5 338 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 C1QTNF9P0C862 333 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 PNLIPP16233 465 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 GPR3P46089 330 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 FASLGP48023 281 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 CAMK2BQ13554 666 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 BOP1Q14137 746 aaKnown RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 KRT33BQ14525 404 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 FASTKD3Q14CZ7 662 aaKnown RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 HIF1AQ16665 826 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 ISXQ2M1V0 245 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 ZNF658BQ4V348 819 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 CAPRIN2Q6IMN6 1127 aaKnown RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 PACS1Q6VY07 963 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 CENPUQ71F23 418 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.328e-81■■□□□ 11.7
SNHG4-201ENST00000448190 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 GPR150Q8NGU9 434 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 HM13Q8TCT9 377 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 NCSTNQ92542 709 aa13.08□□□□□ -0.32
SNHG4-201ENST00000448190 AHCYL2Q96HN2 611 aaKnown RBP13.08□□□□□ -0.32
SNHG4-201ENST00000448190 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms