RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ABCG4Q9H172 646 aa12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 GNPTGQ9UJJ9 305 aa12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 ACSL5Q9ULC5 683 aa12.85□□□□□ -0.35
ERGIC3-209ENST00000447986 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ESYT3A0FGR9 886 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 RHPN2P1A8MT19 583 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 OR1I1O60431 355 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PNLIPP16233 465 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 RPL10P27635 214 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CBLBQ13191 982 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 NFE2L1Q14494 772 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 AGAP9Q5VTM2 703 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 METRNLQ641Q3 311 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 GUSBP11Q6P575 273 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 IYDQ6PHW0 289 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 WASH2PQ6VEQ5 465 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 MICALCLQ6ZW33 695 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ERMP1Q7Z2K6 904 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CILP2Q8IUL8 1156 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ANKMY2Q8IV38 441 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 TRIM48Q8IWZ4 208 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PALM2Q8IXS6 379 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CFAP206Q8IYR0 622 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SFRP1Q8N474 314 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ARL14Q8N4G2 192 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SH3KBP1Q96B97 665 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CERS2Q96G23 380 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CCDC68Q9H2F9 335 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SAYSD1Q9NPB0 183 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 WASH6PQ9NQA3 447 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PRDM8Q9NQV8 689 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 FAM8A1Q9UBU6 413 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PCDHB1Q9Y5F3 818 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 U3KQA8 63 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 H3BMM5 538 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SGTAO43765 313 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SLC35G4P0C7Q5 338 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 MYF5P13349 255 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 RPS3P23396 243 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■□□□ 12.8
ERGIC3-209ENST00000447986 FASLGP48023 281 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ADARP55265 1226 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PLOD1Q02809 727 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 HHEXQ03014 270 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SYTL3Q4VX76 610 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 HSP90AA5PQ58FG0 334 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 C17orf82Q86X59 251 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 IGDCC3Q8IVU1 814 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 WDR48Q8TAF3 677 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 GSDMBQ8TAX9 411 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 SLC37A2Q8TED4 501 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 NAT14Q8WUY8 206 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 ELMO1Q92556 727 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 TOR4AQ9NXH8 423 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 DMGDHQ9UI17 866 aaKnown RBP12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 PLXNB3Q9ULL4 1909 aa12.84□□□□□ -0.35
ERGIC3-209ENST00000447986 CEP250Q9BV73 2442 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 TRBV23OR9-2A0A075B6M9 112 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 A6NCN8 305 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 PRR19A6NJB7 356 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 IFRD1O00458 451 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 KPNA5O15131 536 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 VIPP01282 170 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 ESR1P03372 595 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 EIF3BP55884 814 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 MAZP56270 477 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 PRSS12P56730 875 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 RPA4Q13156 261 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 SLCO6A1Q86UG4 719 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 IFT20Q8IY31 132 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 PNPLA1Q8N8W4 532 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 PATE1Q8WXA2 126 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 IFT81Q8WYA0 676 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 CCDC74AQ96AQ1 378 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 TMEM159Q96B96 161 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 CXorf40BQ96DE9 158 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 COG4Q9H9E3 785 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 SARS2Q9NP81 518 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 IARS2Q9NSE4 1012 aaKnown RBP12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 POT1Q9NUX5 634 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 CRYL1Q9Y2S2 319 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 PRSS21Q9Y6M0 314 aa12.83□□□□□ -0.36
ERGIC3-209ENST00000447986 RNF215Q9Y6U7 377 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms