RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RRP8O43159 456 aaKnown RBP23.49■■□□□ 1.35
C9orf3-207ENST00000445181 SGTAO43765 313 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 AP2A2O94973 939 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 VAPBO95292 243 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 VIPP01282 170 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 PAMP19021 973 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 LSSP48449 732 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-207ENST00000445181 ABRAXAS1Q6UWZ7 409 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 WASH2PQ6VEQ5 465 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 HOOK3Q86VS8 718 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 ZNF761Q86XN6 746 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-207ENST00000445181 LSMEM2Q8N112 164 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 CXorf40BQ96DE9 158 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 ATXN7L3BQ96GX2 97 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 SGSM3Q96HU1 749 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 LINC00615Q96LM1 132 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-207ENST00000445181 CCM2Q9BSQ5 444 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 TRIM31Q9BZY9 425 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 POLR1BQ9H9Y6 1135 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 WASH6PQ9NQA3 447 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 ATXN7L1Q9ULK2 861 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-207ENST00000445181 ENTPD2Q9Y5L3 495 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 MAD1L1Q9Y6D9 718 aa23.49■■□□□ 1.35
C9orf3-207ENST00000445181 OR52A4PA6NMU1 304 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 D6RAR5 112 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 QSOX1O00391 747 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 B4GAT1O43505 415 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 ITPKBP27987 946 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 ABCG1P45844 678 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 C2orf54Q08AI8 447 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 NR1D2Q14995 579 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 MAP9Q49MG5 647 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 METRNLQ641Q3 311 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 PACS1Q6VY07 963 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 CFAP206Q8IYR0 622 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 HM13Q8TCT9 377 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 AHCYL2Q96HN2 611 aaKnown RBP23.48■■□□□ 1.35
C9orf3-207ENST00000445181 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.48■■□□□ 1.35
C9orf3-207ENST00000445181 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.48■■□□□ 1.35
C9orf3-207ENST00000445181 ACSL5Q9ULC5 683 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 WDR37Q9Y2I8 494 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 ITPR1Q14643 2758 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 ZFYVE26Q68DK2 2539 aa23.48■■□□□ 1.35
C9orf3-207ENST00000445181 UNC13CQ8NB66 2214 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 OR1I1O60431 355 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 URI1O94763 535 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 POLBP06746 335 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 BRAFP15056 766 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 XRCC1P18887 633 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 TTPAP49638 278 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 SEMA3AQ14563 771 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 LDB1Q86U70 411 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 ZNF669Q96BR6 464 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 MARCH4Q9P2E8 410 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 ZNF624Q9P2J8 865 aaPredicted RBP23.47■■□□□ 1.35
C9orf3-207ENST00000445181 PRSS21Q9Y6M0 314 aa23.47■■□□□ 1.35
C9orf3-207ENST00000445181 FAM237BA0A1B0GVD1 139 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 EFCAB8A8MWE9 144 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 F8W8V4 182 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 SLC35G4P0C7Q5 338 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 OR56A5P0C7T3 313 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 IVDP26440 423 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 SLC19A1P41440 591 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 MAGEA3P43357 314 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 MAPK9P45984 424 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 UBE2IP63279 158 aaKnown RBP23.46■■□□□ 1.35
C9orf3-207ENST00000445181 CKAP4Q07065 602 aaKnown RBP23.46■■□□□ 1.35
C9orf3-207ENST00000445181 CLCA4Q14CN2 919 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 MORF4L2Q15014 288 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 DNAJC21Q5F1R6 531 aaKnown RBP23.46■■□□□ 1.35
C9orf3-207ENST00000445181 C3orf38Q5JPI3 329 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 NKAIN2Q5VXU1 208 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 MRNIPQ6NTE8 343 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 ZNF449Q6P9G9 518 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 USP53Q70EK8 1073 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 MAATS1Q7Z4T9 603 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 PIM3Q86V86 326 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 OR10G6Q8NH81 332 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 SNF8Q96H20 258 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 CRELD1Q96HD1 420 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 ZNF578Q96N58 590 aaPredicted RBP23.46■■□□□ 1.35
C9orf3-207ENST00000445181 TRIM56Q9BRZ2 755 aaKnown RBP23.46■■□□□ 1.35
C9orf3-207ENST00000445181 WWP1Q9H0M0 922 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 RDH14Q9HBH5 336 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 POT1Q9NUX5 634 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 SATB2Q9UPW6 733 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 RPS6KL1Q9Y6S9 549 aa23.46■■□□□ 1.35
C9orf3-207ENST00000445181 NBEAQ8NFP9 2946 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 IGHV1OR21-1A0A087WYE8 117 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 C17orf113A0A1B0GUU1 675 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 GOLGA8KD6RF30 607 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 GOLGA8TH3BQL2 631 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 DXOO77932 396 aaKnown RBP23.45■■□□□ 1.34
C9orf3-207ENST00000445181 CPNE6O95741 557 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 FTH1P02794 183 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 GPLD1P80108 840 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 MRPS25P82663 173 aaKnown RBP23.45■■□□□ 1.34
C9orf3-207ENST00000445181 ANKRD20A4Q4UJ75 823 aa23.45■■□□□ 1.34
C9orf3-207ENST00000445181 KIAA0930Q6ICG6 404 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms