RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 GIMAP4Q9NUV9 329 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 RCC2Q9P258 522 aaKnown RBP4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 LRP12Q9Y561 859 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 PCDHGA5Q9Y5G8 931 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 CNTLNQ9NXG0 1405 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 PLEKHH2Q8IVE3 1493 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 ABCC2Q92887 1545 aa4.36□□□□□ -1.71
HMGB3P6-201ENST00000444896 POLR1AO95602 1720 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 OR2M5A3KFT3 312 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ASPDHA6ND91 283 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 OR5K3A6NET4 321 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ADAM20O43506 726 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 WDR1O75083 606 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 STARD3NLO95772 234 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ADRB2P07550 413 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 GM2AP17900 193 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 POLR2CP19387 275 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 GNL1P36915 607 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARCN1P48444 511 aaKnown RBP4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTSCP53634 463 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 CD81P60033 236 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ERVFC1-1P60608 527 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMF1P82094 1093 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 KRT79Q5XKE5 535 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 GALNT5Q7Z7M9 940 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 DSG4Q86SJ6 1040 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 NAGSQ8N159 534 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 OR52I2Q8NH67 350 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 JAKMIP2Q96AA8 810 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 MOAP1Q96BY2 351 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF556Q9HAH1 456 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 POU2F3Q9UKI9 436 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF644Q9H582 1327 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 KIF15Q9NS87 1388 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARHGEF12Q9NZN5 1544 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 MAST1Q9Y2H9 1570 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 MYO5CQ9NQX4 1742 aa4.35□□□□□ -1.71
HMGB3P6-201ENST00000444896 LOC102723996A0A087X1L8 192 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 DENND3A2RUS2 1198 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMEM178BH3BS89 294 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 PLK4O00444 970 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 SH2B2O14492 632 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 EIF3DO15371 548 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 AVILO75366 819 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 CREG1O75629 220 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 HSPA5P11021 654 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 SAT1P21673 171 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 NNMTP40261 264 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 RRP1P56182 461 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 GRAPQ13588 217 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 NTRK2Q16620 822 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 IGSF11Q5DX21 431 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 FAM109BQ6ICB4 259 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 OR7E24Q6IFN5 339 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 FAM171BQ6P995 826 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF704Q6ZNC4 412 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 INTS8Q75QN2 995 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 LDB1Q86U70 411 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 TBC1D16Q8TBP0 767 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 PTPMT1Q8WUK0 201 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 PRPF31Q8WWY3 499 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 PHF21AQ96BD5 680 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 SEMA6AQ9H2E6 1030 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 KCNK15Q9H427 330 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 OSGEPL1Q9H4B0 414 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 MBNL1Q9NR56 388 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 MRPL15Q9P015 296 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 LARSQ9P2J5 1176 aaKnown RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 ASTN2O75129 1339 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 MBD5Q9P267 1494 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARHGAP5Q13017 1502 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 SAMD9LQ8IVG5 1584 aa4.34□□□□□ -1.71
HMGB3P6-201ENST00000444896 CDC42BPBQ9Y5S2 1711 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 PLXNC1O60486 1568 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 NUP155O75694 1391 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 CCDC7Q96M83 1385 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF541Q9H0D2 1346 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 NDUFS4O43181 175 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZBTB43O43298 467 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GCNT3O95395 438 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 STAT2P52630 851 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 EEF1A1P68104 462 aaKnown RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GAGE2BQ13066 116 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 BAATQ14032 418 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 FAM98BQ52LJ0 330 aaKnown RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 CFAP58Q5T655 872 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 EEF1A1P5Q5VTE0 462 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GARNL3Q5VVW2 1013 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZDHHC20Q5W0Z9 365 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GAGE2AQ6NT46 116 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 PLXDC2Q6UX71 529 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ADGRA1Q86SQ6 560 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ADIPOR2Q86V24 386 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 DCP1BQ8IZD4 617 aaKnown RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 MUC20Q8N307 709 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms