RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ZFATQ9P243 1243 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 MARCH4Q9P2E8 410 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-208ENST00000444533 LRIT1Q9P2V4 623 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 TBC1D29Q9UFV1 150 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 SLC23A2Q9UGH3 650 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 HEBP2Q9Y5Z4 205 aa13.85□□□□□ -0.19
SSBP3-208ENST00000444533 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 GIPC1O14908 333 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 OR1I1O60431 355 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 SPAG6O75602 509 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 VIPP01282 170 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 ERVK-10P10266 1014 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 PNLIPP16233 465 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 RPS3P23396 243 aaKnown RBP eCLIP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 ARNTP27540 789 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 CA5AP35218 305 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 ACADVLP49748 655 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 HHEXQ03014 270 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 FRG1Q14331 258 aaKnown RBP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 NFE2L1Q14494 772 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 AGAP9Q5VTM2 703 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 METRNLQ641Q3 311 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 GUSBP11Q6P575 273 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 IYDQ6PHW0 289 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 KIAA0408Q6ZU52 694 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 C11orf96Q7Z7L8 435 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 LDB1Q86U70 411 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 RBM12BQ8IXT5 1001 aaKnown RBP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 TRIM56Q9BRZ2 755 aaKnown RBP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 SYNDIG1Q9H7V2 258 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 CAAP1Q9H8G2 361 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 PRDM8Q9NQV8 689 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 IL1RAPL1Q9NZN1 696 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 FBXO5Q9UKT4 447 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 PCYT1BQ9Y5K3 369 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-208ENST00000444533 COMMD10Q9Y6G5 202 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 CFAP54Q96N23 3096 aa13.84□□□□□ -0.19
SSBP3-208ENST00000444533 TRBV23OR9-2A0A075B6M9 112 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 KDM1AO60341 852 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 NOBOXO60393 691 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CHRM3P20309 590 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 NDUFS1P28331 727 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 FMO4P31512 558 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 PHBP35232 272 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 MAGEA4P43358 317 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 GPR3P46089 330 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 ADARP55265 1226 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 MGAT5Q09328 741 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CBLBQ13191 982 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CTBP1Q13363 440 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 BOP1Q14137 746 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 SEMA3AQ14563 771 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 ABRAXAS1Q6UWZ7 409 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CAPN12Q6ZSI9 719 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 C3orf62Q6ZUJ4 267 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 OTOAQ7RTW8 1153 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 NAGSQ8N159 534 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 AGGF1Q8N302 714 aaeCLIP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 GALNT15Q8N3T1 639 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 SFRP1Q8N474 314 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 ARL14Q8N4G2 192 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CCDC74AQ96AQ1 378 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 AHCYL2Q96HN2 611 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 COG4Q9H9E3 785 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 SARS2Q9NP81 518 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 POT1Q9NUX5 634 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CPNE7Q9UBL6 633 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 DMGDHQ9UI17 866 aaKnown RBP13.83□□□□□ -0.2
SSBP3-208ENST00000444533 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 CRYL1Q9Y2S2 319 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 COLEC10Q9Y6Z7 277 aa13.83□□□□□ -0.2
SSBP3-208ENST00000444533 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 TP73O15350 636 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-208ENST00000444533 ALDH4A1P30038 563 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 STX2P32856 288 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 SLC1A2P43004 574 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 FASLGP48023 281 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
SSBP3-208ENST00000444533 BRD3Q15059 726 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 TTLL9Q3SXZ7 439 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 UGT3A1Q6NUS8 523 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 ZDHHC24Q6UX98 284 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 ERMP1Q7Z2K6 904 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 IGDCC3Q8IVU1 814 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 OR10G6Q8NH81 332 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 SLC37A2Q8TED4 501 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 SKA2Q8WVK7 121 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-208ENST00000444533 LPGAT1Q92604 370 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 C12orf66Q96MD2 445 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 CCDC3Q9BQI4 270 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 FBXO6Q9NRD1 293 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms