RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TADA1Q96BN2 335 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 HDAC11Q96DB2 347 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 HRASLS2Q9NWW9 162 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 SRPK3Q9UPE1 567 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 ZNF711Q9Y462 761 aa14.05□□□□□ -0.16
HMGN1-208ENST00000443046 FER1L5A0AVI2 2057 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 PIRTP0C851 137 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 MSL3P1P0C860 447 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-208ENST00000443046 GBE1Q04446 702 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 ABRQ12979 859 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 ATP1A4Q13733 1029 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 ATP13A5Q4VNC0 1218 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 FAM83HQ6ZRV2 1179 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-208ENST00000443046 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
HMGN1-208ENST00000443046 AMZ2Q86W34 360 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 TRAPPC5Q8IUR0 188 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 ZFPM2Q8WW38 1151 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 IMP4Q96G21 291 aaKnown RBP14.04□□□□□ -0.16
HMGN1-208ENST00000443046 BTBD6Q96KE9 485 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 PCMTD2Q9NV79 361 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 IP6K2Q9UHH9 426 aa14.04□□□□□ -0.16
HMGN1-208ENST00000443046 DNMT3AQ9Y6K1 912 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-208ENST00000443046 CCDC88CQ9P219 2028 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 AURKAO14965 403 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 MTHFD1P11586 935 aaKnown RBP14.03□□□□□ -0.16
HMGN1-208ENST00000443046 MX2P20592 715 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
HMGN1-208ENST00000443046 MYL5Q02045 173 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 PPIDQ08752 370 aaKnown RBP14.03□□□□□ -0.16
HMGN1-208ENST00000443046 ZBTB17Q13105 803 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 RAPSNQ13702 412 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 ASIC2Q16515 512 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 TMTC4Q5T4D3 741 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 METRNLQ641Q3 311 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 SYTL1Q8IYJ3 562 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 RASGEF1AQ8N9B8 481 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 BRSK1Q8TDC3 778 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 PPM1MQ96MI6 270 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 ZNF670Q9BS34 389 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 GPR63Q9BZJ6 419 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 PSMD13Q9UNM6 376 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 ENTPD4Q9Y227 616 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 NTNG1Q9Y2I2 539 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 SPO11Q9Y5K1 396 aa14.03□□□□□ -0.16
HMGN1-208ENST00000443046 KCNK1O00180 336 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 HNRNPRO43390 633 aaKnown RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 POP7O75817 140 aaKnown RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 KLF7O75840 302 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 LCA5LO95447 670 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 CA5AP35218 305 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 HMGCLP35914 325 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 CTSCP53634 463 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SOX8P57073 446 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 CDK18Q07002 472 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 NCF4Q15080 339 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 PLCL1Q15111 1095 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SLC14A2Q15849 920 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 ZNF385CQ66K41 422 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SPOCD1Q6ZMY3 1216 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 Q6ZS92 163 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 OOSP2Q86WS3 158 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 ST6GALNAC3Q8NDV1 305 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 OR1L3Q8NH93 324 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SGSM3Q96HU1 749 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 INSM2Q96T92 566 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 ZNF552Q9H707 407 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SYTL2Q9HCH5 934 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 SLC24A2Q9UI40 661 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 COPG1Q9Y678 874 aaKnown RBP14.02□□□□□ -0.17
HMGN1-208ENST00000443046 ZGRF1Q86YA3 2104 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.17
HMGN1-208ENST00000443046 CNTRLQ7Z7A1 2325 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
HMGN1-208ENST00000443046 HNRNPH3P31942 346 aaKnown RBP14.01□□□□□ -0.17
HMGN1-208ENST00000443046 HADHAP40939 763 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 KLHL30Q0D2K2 578 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 GTF2H3Q13889 308 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 NFE2L1Q14494 772 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 MYBPC3Q14896 1274 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 PDK2Q15119 407 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 FAM182AQ5T1J6 154 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 FBXO38Q6PIJ6 1188 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 MRGPREQ86SM8 312 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 RAB43Q86YS6 212 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 CCNYQ8ND76 341 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 UBE2Q2Q8WVN8 375 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 CLIP3Q96DZ5 547 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 IP6K3Q96PC2 410 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 SRPK1Q96SB4 655 aaKnown RBP14.01□□□□□ -0.17
HMGN1-208ENST00000443046 DPH2Q9BQC3 489 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-208ENST00000443046 DHRS4Q9BTZ2 278 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 TLR10Q9BXR5 811 aa14.01□□□□□ -0.17
HMGN1-208ENST00000443046 THAP2Q9H0W7 228 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms