RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PRAMEF33A0A0G2JMD5 474 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 MED19A0JLT2 244 aaPredicted RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 PRMT5O14744 637 aaPredicted RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 NDUFS3O75489 264 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 F3P13726 295 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 ITGB6P18564 788 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 CLDN6P56747 220 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 GPX6P59796 221 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 THOC5Q13769 683 aaKnown RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 CLCA4Q14CN2 919 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 UBAP2Q5T6F2 1119 aaKnown RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 ZNF549Q6P9A3 640 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 ABRAXAS1Q6UWZ7 409 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 CAPN12Q6ZSI9 719 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 EFL1Q7Z2Z2 1120 aaKnown RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 SDCCAG8Q86SQ7 713 aaPredicted RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 CFAP206Q8IYR0 622 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 IFT81Q8WYA0 676 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 GLMNQ92990 594 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 CCDC74AQ96AQ1 378 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 CERS2Q96G23 380 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 TCF12Q99081 682 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 TTC1Q99614 292 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 ZNF624Q9P2J8 865 aaPredicted RBP15.72■□□□□ 0.11
USP39-205ENST00000442708 FBXO5Q9UKT4 447 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 PSMD13Q9UNM6 376 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 CRYL1Q9Y2S2 319 aa15.72■□□□□ 0.11
USP39-205ENST00000442708 C17orf113A0A1B0GUU1 675 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 UBA6A0AVT1 1052 aaPredicted RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 OR52A4PA6NMU1 304 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PPM1DO15297 605 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 KCNJ13O60928 360 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PIAS1O75925 651 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 HAUS5O94927 633 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 VCLP18206 1134 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 IDSP22304 550 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 RPS3P23396 243 aaKnown RBP eCLIP15.71■□□□□ 0.113e-13■■■■□ 26.3
USP39-205ENST00000442708 GABRB3P28472 473 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PDHA2P29803 388 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 SSTR1P30872 391 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 FMO4P31512 558 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 CCR7P32248 378 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PPARGP37231 505 aaPredicted RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 SLC19A1P41440 591 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PREPP48147 710 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 RPIAP49247 311 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 EIF3BP55884 814 aaKnown RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 FRG1Q14331 258 aaKnown RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 TEDDM1Q5T9Z0 273 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 AGAP9Q5VTM2 703 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 WASH2PQ6VEQ5 465 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 C2CD4AQ8NCU7 369 aaPredicted RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
USP39-205ENST00000442708 HM13Q8TCT9 377 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PYROXD1Q8WU10 500 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 C9orf72Q96LT7 481 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 FAM167BQ9BTA0 163 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PHACTR1Q9C0D0 580 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 WWP1Q9H0M0 922 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 COG4Q9H9E3 785 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 WASH6PQ9NQA3 447 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 MOCS1Q9NZB8 636 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 NCKIPSDQ9NZQ3 722 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 LRIT1Q9P2V4 623 aa15.71■□□□□ 0.11
USP39-205ENST00000442708 PDZK1P1A8MUH7 402 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 RFPL3O75679 317 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 TOP3BO95985 862 aaKnown RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 FTH1P02794 183 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 OR56A5P0C7T3 313 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 GLB1P16278 677 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 MAGEA4P43358 317 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 ABCG1P45844 678 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 DUSP3P51452 185 aaPredicted RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 UBE2IP63279 158 aaKnown RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 BRD3Q15059 726 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 TEX35Q5T0J7 233 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 RNF187Q5TA31 235 aaPredicted RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 PTRHD1Q6GMV3 140 aaKnown RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 CNSTQ6PJW8 725 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 DHRS13Q6UX07 377 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 ZNF438Q7Z4V0 828 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 CNTN4Q8IWV2 1026 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 GSDMBQ8TAX9 411 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 MAPK15Q8TD08 544 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 RMDN2Q96LZ7 410 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 FOXP3Q9BZS1 431 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 SMYD2Q9NRG4 433 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 INTS10Q9NVR2 710 aaKnown RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 GALPQ9UBC7 116 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 PCDHGA1Q9Y5H4 931 aa15.7■□□□□ 0.1
USP39-205ENST00000442708 CFAP20Q9Y6A4 193 aaKnown RBP15.7■□□□□ 0.1
USP39-205ENST00000442708 KIR2DS5A0A0G2JLQ3 304 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 A0A0G2JNG1 304 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 SLC5A10A0PJK1 596 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 KLHL33A6NCF5 533 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 KIR2DS3K7RE56 304 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 NUDT21O43809 227 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 NIPSNAP2O75323 286 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 KRT37O76014 449 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms