RNA–Protein interactions for RNA: ENST00000440545.1

AC007879.4-201, humanhuman

TSL 3 BASIC

Gene AC007879.4, Length 361 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.4-201ENST00000440545 TRMT1Q9NXH9 659 aaKnown RBP3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 GDE1Q9NZC3 331 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 SMARCAL1Q9NZC9 954 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 ZNF224Q9NZL3 707 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 RHCGQ9UBD6 479 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 UBA2Q9UBT2 640 aaPredicted RBP3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 AMDHD2Q9Y303 409 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 PTPRTO14522 1441 aa3.35□□□□□ -1.87
AC007879.4-201ENST00000440545 PRSS51A0A1B0GVH4 220 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 OR2M5A3KFT3 312 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 OR5K3A6NET4 321 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 C5orf60A6NFR6 353 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 C4orf47A7E2U8 309 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 H7C0S8 307 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TO15178 435 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 NDUFS4O43181 175 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 XRCC3O43542 346 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 WDR1O75083 606 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE7O76087 117 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TOMM70O94826 608 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 OAZ2O95190 189 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 BMP10O95393 424 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TRUB2O95900 331 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 FASLGP48023 281 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 HNRNPKP61978 463 aaKnown RBP eCLIP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 SNRPEP62304 92 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 RALGDSQ12967 914 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE1Q13065 139 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GAGE4Q13068 117 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 PLA2G7Q13093 441 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 ZBTB17Q13105 803 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 ALCAMQ13740 583 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GTF2H2Q13888 395 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 C15orf59Q2T9L4 293 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TMEM35AQ53FP2 167 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GTF2H2CQ6P1K8 395 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 FAM171BQ6P995 826 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 SHQ1Q6PI26 577 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 PRSS57Q6UWY2 283 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 ASB18Q6ZVZ8 466 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 CREB3L2Q70SY1 520 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 EPHX4Q8IUS5 362 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 SPATA2LQ8IUW3 424 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 FAM114A1Q8IWE2 563 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GCSAMQ8N6F7 178 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 C1orf52Q8N6N3 182 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TC2NQ8N9U0 490 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 LMO3Q8TAP4 145 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 NUDCD2Q8WVJ2 157 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 MED30Q96HR3 178 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 BAG1Q99933 345 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 FNDC11Q9BVV2 318 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 GPR88Q9GZN0 384 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 MMP27Q9H306 513 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 CNOT10Q9H9A5 744 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 TMEM30AQ9NV96 361 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 NPAP1Q9NZP6 1156 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 RCC2Q9P258 522 aaKnown RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 MARCH4Q9P2E8 410 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 CFDP1Q9UEE9 299 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 ANAPC2Q9UJX6 822 aa3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 ZHX1Q9UKY1 873 aaPredicted RBP3.34□□□□□ -1.87
AC007879.4-201ENST00000440545 LAMC3Q9Y6N6 1575 aa3.34□□□□□ -1.88
AC007879.4-201ENST00000440545 TSPOAP1O95153 1857 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 LOC100509620A0A075B734 347 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 TRBC2A0A5B9 178 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 GOLGA6L9A6NEM1 432 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 PRR23D1E9PI22 279 aaPredicted RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 EIF3DO15371 548 aaKnown RBP eCLIP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 SYNCRIPO60506 623 aaKnown RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 PPP1R3DO95685 299 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 PRR23D2P0DMB1 279 aaPredicted RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 SNHG28P0DPA3 235 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 MYBL1P10243 752 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 ACP2P11117 423 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 VPREB1P12018 145 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 CDH1P12830 882 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 GLULP15104 373 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 POLR2CP19387 275 aaPredicted RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 NR2F2P24468 414 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 PSMC4P43686 418 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KCNJ4P48050 445 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 CCR3P51677 355 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 ARSEP51690 589 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 FUT6P51993 359 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KIF5AQ12840 1032 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KLHL26Q53HC5 615 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 IRAK1BP1Q5VVH5 260 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 DHRS7BQ6IAN0 325 aaPredicted RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 MEPCEQ7L2J0 689 aaKnown RBP3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 KRT74Q7RTS7 529 aa3.33□□□□□ -1.88
AC007879.4-201ENST00000440545 SLC9B2Q86UD5 537 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms