RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PIM3Q86V86 326 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 HOOK3Q86VS8 718 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ERICH1Q86X53 443 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RHPN2Q8IUC4 686 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC50Q8IVM0 306 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 THNSL1Q8IYQ7 743 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 KATNAL2Q8IYT4 538 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RCOR2Q8IZ40 523 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 C12orf76Q8N812 135 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RNF149Q8NC42 400 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMEM35BQ8NCS4 154 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 BBOF1Q8ND07 529 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 EXD1Q8NHP7 514 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 GRK7Q8WTQ7 553 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 AFG1LQ8WV93 481 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 C1orf54Q8WWF1 131 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF606Q8WXB4 792 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RSC1A1Q92681 617 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLCO2A1Q92959 643 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ART4Q93070 314 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SDCCAG3Q96C92 435 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 OPTNQ96CV9 577 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZDHHC12Q96GR4 267 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANKRD36BP1Q96IX9 119 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 CLMNQ96JQ2 1002 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TWNKQ96RR1 684 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 C11orf70Q9BRQ4 267 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 WACQ9BTA9 647 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRMOQ9BU70 441 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TXLNGYQ9BZA5 131 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 DCLK3Q9C098 648 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM107BQ9H098 131 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TSPYL1Q9H0U9 437 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 FZD8Q9H461 694 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TXNRD2Q9NNW7 524 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PARVAQ9NVD7 372 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 PRMT7Q9NVM4 692 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASIC5Q9NY37 505 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 ERAP1Q9NZ08 941 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 TNFSF13BQ9Y275 285 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMCHD1A6NHR9 2005 aa3.51□□□□□ -1.85
HMGB3P11-201ENST00000440127 GRIN2DO15399 1336 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 UMODL1Q5DID0 1318 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A087X0M5 115 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A1B0GX30 115 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 F5H0A9 414 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MED7O43513 233 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNPH1O43598 174 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM189A1O60320 539 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TULP3O75386 442 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT19P08727 400 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PAEPP09466 180 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 HOXC6P09630 235 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 WEE2P0C1S8 567 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MCF2P10911 925 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 APEHP13798 732 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CD58P19256 250 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MMP8P22894 467 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMOD1P28289 359 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 HPDP32754 393 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDH5P33151 784 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCNJ1P48048 391 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 DGKQP52824 942 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ALDH18A1P54886 795 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 FOXG1P55316 489 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TAS2R40P59535 323 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MAGOHP61326 146 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 OSTNP61366 133 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF91Q05481 1191 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MBTD1Q05BQ5 628 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PDCLQ13371 301 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SNX1Q13596 522 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTK6Q13882 451 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PIGHQ14442 188 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 RBMS2Q15434 407 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTGISQ16647 500 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 KYAT1Q16773 422 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF699Q32M78 642 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PTCHD3Q3KNS1 767 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 C2CD6Q53TS8 623 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC45A4Q5BKX6 768 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZNF667Q5HYK9 610 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAXCQ5TGI0 409 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 LRRC38Q5VT99 294 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TTC19Q6DKK2 380 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 DNAJC24Q6P3W2 148 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 DCUN1D2Q6PH85 259 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 C4orf50Q6ZRC1 276 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 B4GALNT4Q76KP1 1039 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRMT10CQ7L0Y3 403 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARMCX2Q7L311 632 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANKS1BQ7Z6G8 1248 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 UBE2Q1Q7Z7E8 422 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 FBXO16Q8IX29 292 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 WDTC1Q8N5D0 677 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM71DQ8N9W8 422 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 GPRC5AQ8NFJ5 357 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 OR6Y1Q8NGX8 325 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms