RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IFNB1P01574 187 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 ANKRD34CP0C6C1 535 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 LY6DQ14210 128 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 KRT33BQ14525 404 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 GSE1Q14687 1217 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 RPE65Q16518 533 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 FAM83HQ6ZRV2 1179 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 FAM92BQ6ZTR7 304 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 TAS2R42Q7RTR8 314 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 NXPE1Q8N323 547 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 BMPERQ8N8U9 685 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 GPR150Q8NGU9 434 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 SLC35B2Q8TB61 432 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 NAT14Q8WUY8 206 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 HEXDCQ8WVB3 486 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 TTC9Q92623 222 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 NKD1Q969G9 470 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 RTP4Q96DX8 246 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 WBP1Q96G27 269 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 DNAJC1Q96KC8 554 aaKnown RBP19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 C12orf66Q96MD2 445 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 WWP1Q9H0M0 922 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 VPS37BQ9H9H4 285 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 PIH1D1Q9NWS0 290 aaKnown RBP19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 OGFRQ9NZT2 677 aa19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 CFAP20Q9Y6A4 193 aaKnown RBP19.45■□□□□ 0.7
SHROOM1-204ENST00000440118 COL6A6A6NMZ7 2263 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 ARHGAP6O43182 974 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 NRDCO43847 1150 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 C9P02748 559 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 MTHFD1P11586 935 aaKnown RBP19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 TPH1P17752 444 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 LEPRP48357 1165 aaKnown RBP19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 BCL7AQ4VC05 210 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 CACHD1Q5VU97 1274 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 LINC00523Q86TU6 105 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 NLGN4XQ8N0W4 816 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 DNAAF3Q8N9W5 541 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 NLGN4YQ8NFZ3 816 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 OR2L2Q8NH16 312 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 FRMD8P1Q9BZ68 369 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 ARNT2Q9HBZ2 717 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 FBXO8Q9NRD0 319 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 ACSL5Q9ULC5 683 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 ZNF148Q9UQR1 794 aa19.44■□□□□ 0.7
SHROOM1-204ENST00000440118 CCDC78A2IDD5 438 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 TOX3O15405 576 aaPredicted RBP19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 LDB2O43679 373 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 AP2A1O95782 977 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 POLBP06746 335 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 CCDC175P0C221 793 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 ARL4DP49703 201 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 ARSDP51689 593 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 XIAPP98170 497 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 RPS6KA1Q15418 735 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 GPR33Q49SQ1 333 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 METRNLQ641Q3 311 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 DENND5AQ6IQ26 1287 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 ARMC6Q6NXE6 501 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 ZNF449Q6P9G9 518 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 PCSK4Q6UW60 755 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 PPP1R21Q6ZMI0 780 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 CCDC89Q8N998 374 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 ZNF768Q9H5H4 540 aaKnown RBP19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 APMAPQ9HDC9 416 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 LZTFL1Q9NQ48 299 aa19.43■□□□□ 0.7
SHROOM1-204ENST00000440118 C1QL1O75973 258 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 STK17BO94768 372 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 ATP1B2P14415 290 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 LIFP15018 202 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 KCTD11Q693B1 232 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 DUS1LQ6P1R4 473 aaKnown RBP19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 CYB5D1Q6P9G0 228 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 PRSS42Q7Z5A4 293 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 SLC13A5Q86YT5 568 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 RASGRP3Q8IV61 690 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 CFAP206Q8IYR0 622 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 HM13Q8TCT9 377 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 ELMO2Q96JJ3 720 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 OR6C1Q96RD1 312 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 C19orf43Q9BQ61 176 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 ULBP3Q9BZM4 244 aa19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 GPN2Q9H9Y4 310 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-204ENST00000440118 GCN1Q92616 2671 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 ERI2A8K979 691 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 LIASO43766 372 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 ITGB2P05107 769 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 STIP1P31948 543 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 PRLHRP49683 370 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 SNX1Q13596 522 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 DNTTIP2Q5QJE6 756 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 SERPINA9Q86WD7 417 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 OOSP2Q86WS3 158 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 KLHDC8BQ8IXV7 354 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 ZNF843Q8N446 348 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 STYXQ8WUJ0 223 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 UBE2Q2Q8WVN8 375 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 C1orf54Q8WWF1 131 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 EXTL1Q92935 676 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.41■□□□□ 0.77e-6■■■■■ 27.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms