RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.17■■□□□ 1.3
VARS-217ENST00000440048 CDRT15L2A8MXV6 281 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 ITGA2BP08514 1039 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 TERF1P54274 439 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 GNG11P61952 73 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 CRADDP78560 199 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 CDK16Q00536 496 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 RPE65Q16518 533 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 PCID2Q5JVF3 399 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 CCDC137Q6PK04 289 aaKnown RBP23.17■■□□□ 1.3
VARS-217ENST00000440048 RCBTB1Q8NDN9 531 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 NCSTNQ92542 709 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 CMKLR1Q99788 373 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 EPB41L1Q9H4G0 881 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 SLC40A1Q9NP59 571 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 PISDQ9UG56 409 aa23.17■■□□□ 1.3
VARS-217ENST00000440048 AP3B1O00203 1094 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 PHF2O75151 1096 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 GOT2P00505 430 aaKnown RBP23.16■■□□□ 1.3
VARS-217ENST00000440048 JMJD7P0C870 316 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 THRAP10827 490 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 NPY2RP49146 381 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 PCBP4P57723 403 aaKnown RBP23.16■■□□□ 1.3
VARS-217ENST00000440048 TRA2AQ13595 282 aaKnown RBP eCLIP23.16■■□□□ 1.3
VARS-217ENST00000440048 KCNJ11Q14654 390 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 WDR74Q6RFH5 385 aaPredicted RBP23.16■■□□□ 1.3
VARS-217ENST00000440048 AFTPHQ6ULP2 937 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 ZNF534Q76KX8 674 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 CLEC14AQ86T13 490 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 CLDN19Q8N6F1 224 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 PEX13Q92968 403 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 WWP1Q9H0M0 922 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 CHRAC1Q9NRG0 131 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 BFARQ9NZS9 450 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 PDP2Q9P2J9 529 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 ACSL5Q9ULC5 683 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 NEU2Q9Y3R4 380 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 PTPRQQ9UMZ3 2332 aa23.16■■□□□ 1.3
VARS-217ENST00000440048 GOLGA6L10A0A0M3HER8 536 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 HGSO14964 777 aaPredicted RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 RRP8O43159 456 aaKnown RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 TCP1P17987 556 aaKnown RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 ITIH1P19827 911 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 ETV5P41161 510 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 MAGEA6P43360 314 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 GPR18Q14330 331 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 ITIH4Q14624 930 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 LRRC8BQ6P9F7 803 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 C19orf48Q6RUI8 117 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 LRRC69Q6ZNQ3 347 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 RBM12BQ8IXT5 1001 aaKnown RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 CFAP206Q8IYR0 622 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 LILRA3Q8N6C8 439 aaPredicted RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 GPR150Q8NGU9 434 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 OR6P1Q8NGX9 317 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 HM13Q8TCT9 377 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 HNRNPLLQ8WVV9 542 aaKnown RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 CCM2Q9BSQ5 444 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 IL22Q9GZX6 179 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 OGFRQ9NZT2 677 aa23.15■■□□□ 1.3
VARS-217ENST00000440048 AKAP7Q9P0M2 348 aaPredicted RBP23.15■■□□□ 1.3
VARS-217ENST00000440048 C17orf113A0A1B0GUU1 675 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 POLBP06746 335 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 TYRP1P17643 537 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 MGAT1P26572 445 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 FNTAP49354 379 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 PRAMEP78395 509 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 CCDC173Q0VFZ6 552 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 ZNF248Q8NDW4 579 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 OR4L1Q8NH43 312 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.14■■□□□ 1.29
VARS-217ENST00000440048 INSM2Q96T92 566 aaPredicted RBP23.14■■□□□ 1.29
VARS-217ENST00000440048 CFAP20Q9Y6A4 193 aaKnown RBP23.14■■□□□ 1.29
VARS-217ENST00000440048 PRSS21Q9Y6M0 314 aa23.14■■□□□ 1.29
VARS-217ENST00000440048 UBXN7O94888 489 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 AP2A2O94973 939 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 SLC35G4P0C7Q5 338 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 MTHFD1P11586 935 aaKnown RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 NSG1P42857 185 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 COL28A1Q2UY09 1125 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 ZNF658BQ4V348 819 aaPredicted RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 SNAP47Q5SQN1 464 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 LYPLAL1Q5VWZ2 237 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 ANKRD22Q5VYY1 191 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 PAPD7Q5XG87 772 aaKnown RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 PACS1Q6VY07 963 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 JAMLQ86YT9 394 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 SPDYE1Q8NFV5 336 aaPredicted RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 CPT1BQ92523 772 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 NAF1Q96HR8 494 aaKnown RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 SGSM3Q96HU1 749 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 C12orf66Q96MD2 445 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 VPS37BQ9H9H4 285 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 TREX1Q9NSU2 369 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 IMP3Q9NV31 184 aaKnown RBP23.13■■□□□ 1.29
VARS-217ENST00000440048 SYBUQ9NX95 663 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 PCDHGA7Q9Y5G6 932 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 AHCTF1Q8WYP5 2266 aa23.13■■□□□ 1.29
VARS-217ENST00000440048 CCL4P13236 92 aa23.12■■□□□ 1.29
VARS-217ENST00000440048 AMD1P17707 334 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms