RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 AHSPQ9NZD4 102 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLCO3A1Q9UIG8 710 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RBMX2Q9Y388 322 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3DA0A087WVF3 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3IA0A087WXS9 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3EA0A087X179 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3KA0A087X1G2 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3FA6NER0 549 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3LB9A6J9 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RNASEH2AO75792 299 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ASLP04424 464 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 CAPN1P07384 714 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3HP0C7X1 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 FGF3P11487 239 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 FSHRP23945 695 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 DLG1Q12959 904 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PWP1Q13610 501 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 CYP2A13Q16696 494 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PAGE2BQ5JRK9 111 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3GQ6DHY5 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3CQ6IPX1 549 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF783Q6ZMS7 281 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SATL1Q86VE3 508 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 C11orf74Q86VG3 221 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 OOSP2Q86WS3 158 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PHYKPLQ8IUZ5 450 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBC1D3Q8IZP1 549 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 WFIKKN2Q8TEU8 576 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 LINC01599Q8WXQ3 324 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TDRD1Q9BXT4 1180 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RNF38Q9H0F5 515 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZDHHC2Q9UIJ5 367 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PRPF19Q9UMS4 504 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF839A8K0R7 811 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 MAN1A2O60476 641 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ALBP02768 609 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC35E2BP0CK96 405 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 FASP25445 335 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC6A4P31645 630 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 GRIA3P42263 894 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 HERVK_113P63132 956 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 NTHL1P78549 312 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 FOLH1Q04609 750 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRAF2Q12933 501 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 NAE1Q13564 534 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 LIN52Q52LA3 116 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RRM2BQ7LG56 351 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 DSELQ8IZU8 1212 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ERVK-6Q9BXR3 956 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC28A1O00337 649 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC22A3O75751 556 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 DNTTP04053 509 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 LRRC66Q68CR7 880 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 KLHDC10Q6PID8 442 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 APCDD1Q8J025 514 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 AHI1Q8N157 1196 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 GPR156Q8NFN8 814 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 REPS1Q96D71 796 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 RNF145Q96MT1 663 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 DGCR6LQ9BY27 220 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 NLE1Q9NVX2 485 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 LIMD1Q9UGP4 676 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ADAMTS6Q9UKP5 1117 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 COL11A1P12107 1806 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRIM38O00635 465 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ECI2O75521 394 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC35G4P0C7Q5 338 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 LEPRP48357 1165 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 BRAT1Q6PJG6 821 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 DPY19L3Q6ZPD9 716 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CEP97Q8IW35 865 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 EEF1AKMT1Q8WVE0 214 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 MOCOSQ96EN8 888 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 TSSK3Q96PN8 268 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 SPHK2Q9NRA0 654 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMA7Q9Y2S6 64 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 POLR3HQ9Y535 204 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 A0A088AWK7 358 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ANKDD1BA6NHY2 528 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 PGLSO95336 258 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 COX7A2P14406 83 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 ATP6V1B2P21281 511 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CCR10P46092 362 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLK1P49759 484 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 SEMA3BQ13214 749 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMEM220Q6QAJ8 160 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 HORMAD1Q86X24 394 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 NAT14Q8WUY8 206 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 CCDC106Q9BWC9 280 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 EGFL7Q9UHF1 273 aa11.41□□□□□ -0.58
TRAPPC9-202ENST00000438773 INVSQ9Y283 1065 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms