RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TPSB2P20231 275 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 MPSTP25325 297 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 CDKN1CP49918 316 aaPredicted RBP24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 GSTM4Q03013 218 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 ITIH4Q14624 930 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 TPSAB1Q15661 275 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 LYPLAL1Q5VWZ2 237 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 AFTPHQ6ULP2 937 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 SPACA3Q8IXA5 215 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 PIANPQ8IYJ0 282 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 OR13J1Q8NGT2 312 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 ACTRT1Q8TDG2 376 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 NAF1Q96HR8 494 aaKnown RBP24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 B3GNT4Q9C0J1 378 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 IL22Q9GZX6 179 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 BFARQ9NZS9 450 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 SNX12Q9UMY4 172 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 GOLGA6L10A0A0M3HER8 536 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 CCDC162PA2VCL2 907 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 AGRPO00253 132 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 AP2A2O94973 939 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 SLC35G4P0C7Q5 338 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 ITPKBP27987 946 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 SLC5A2P31639 672 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 NSG1P42857 185 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 MAPK10P53779 464 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 PRAMEP78395 509 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 ACVR1Q04771 509 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 GPR18Q14330 331 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 RPE65Q16518 533 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 DBN1Q16643 649 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 CYP1B1Q16678 543 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 PCID2Q5JVF3 399 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 BROXQ5VW32 411 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 CFAP206Q8IYR0 622 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 NAT14Q8WUY8 206 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 HDAC10Q969S8 669 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 CCM2Q9BSQ5 444 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 AP1M1Q9BXS5 423 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 FAM8A1Q9UBU6 413 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 ACSL6Q9UKU0 697 aa24.22■■□□□ 1.47
RAPGEF1-206ENST00000438647 MN1Q10571 1320 aaPredicted RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 PRSS56P0CW18 603 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 FOXN2P32314 431 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 PPARGP37231 505 aaPredicted RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 NPY2RP49146 381 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 SESN2P58004 480 aaPredicted RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 SARNPP82979 210 aaKnown RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 TLE3Q04726 772 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 SNAP47Q5SQN1 464 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 ZNF449Q6P9G9 518 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 CERS6Q6ZMG9 384 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 OR6P1Q8NGX9 317 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 COG1Q8WTW3 980 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 WWP1Q9H0M0 922 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 IMP3Q9NV31 184 aaKnown RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 SMARCAL1Q9NZC9 954 aa24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.21■■□□□ 1.47
RAPGEF1-206ENST00000438647 ADAMTS20P59510 1910 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 OR51F1A6NGY5 319 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 F8W8V4 182 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 KRT14P02533 472 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 MTHFD1P11586 935 aaKnown RBP24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 TYRP1P17643 537 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 COILP38432 576 aaPredicted RBP24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 ETV5P41161 510 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 UCNP55089 124 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 GPS1Q13098 491 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 TRIP13Q15645 432 aaPredicted RBP24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 TTC27Q6P3X3 843 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 KLHL35Q6PF15 583 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 CCDC137Q6PK04 289 aaKnown RBP24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 PACS1Q6VY07 963 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 OR4L1Q8NH43 312 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 ZFPM2Q8WW38 1151 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 USP7Q93009 1102 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 SGSM3Q96HU1 749 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 C12orf66Q96MD2 445 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 SLC2A6Q9UGQ3 507 aa24.2■■□□□ 1.46
RAPGEF1-206ENST00000438647 KLK10O43240 276 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 GOT2P00505 430 aaKnown RBP24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 CCL4P13236 92 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 TCP1P17987 556 aaKnown RBP24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 CD82P27701 267 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 CAPZBP47756 277 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 VPS41P49754 854 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 GSE1Q14687 1217 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 FASTKD1Q53R41 847 aaKnown RBP24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 AARS2Q5JTZ9 985 aaKnown RBP24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 LRRC8BQ6P9F7 803 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 ARHGAP22Q7Z5H3 698 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 CLDN19Q8N6F1 224 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 GPR150Q8NGU9 434 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 GRK7Q8WTQ7 553 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 ZNF778Q96MU6 729 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 TAAR9Q96RI9 348 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 OGFRQ9NZT2 677 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 KLHL3Q9UH77 587 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 ANAPC5Q9UJX4 755 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms