RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 CD84Q9UIB8 345 aa10.73□□□□□ -0.69
RTN4-211ENST00000438462 CR1P17927 2039 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 A0A1W2PPR1 153 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 PDZK1P1A8MUH7 402 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 KDELR3O43731 214 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 CD5LO43866 347 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 HEXIM1O94992 359 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 MYBL2P10244 700 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 DCDP81605 110 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 PMPCAQ10713 525 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 FAM174BQ3ZCQ3 159 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 BRMS1LQ5PSV4 323 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 TRIM72Q6ZMU5 477 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 MCATQ8IVS2 390 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 RBM12BQ8IXT5 1001 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 OR11G2Q8NGC1 345 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 CXorf40BQ96DE9 158 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 INTS4Q96HW7 963 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 COX14Q96I36 57 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 FRMD6Q96NE9 622 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 TUBGCP5Q96RT8 1024 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 ATP13A3Q9H7F0 1226 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 VPS18Q9P253 973 aa10.72□□□□□ -0.69
RTN4-211ENST00000438462 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
RTN4-211ENST00000438462 RAMP2O60895 175 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 PAEPP09466 180 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 LHCGRP22888 699 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 TACR1P25103 407 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 UQCRC1P31930 480 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 PEX19P40855 299 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 GPD2P43304 727 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 YWHAEP62258 255 aaKnown RBP10.71□□□□□ -0.69
RTN4-211ENST00000438462 DPTQ07507 201 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 POU4F3Q15319 338 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 STILQ15468 1287 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 INO80DQ53TQ3 878 aaPredicted RBP10.71□□□□□ -0.69
RTN4-211ENST00000438462 KLHL35Q6PF15 583 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 RFLNAQ6ZTI6 216 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 MEX3DQ86XN8 651 aaKnown RBP10.71□□□□□ -0.69
RTN4-211ENST00000438462 KBTBD2Q8IY47 623 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 PLD6Q8N2A8 252 aaKnown RBP10.71□□□□□ -0.69
RTN4-211ENST00000438462 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 C1orf74Q96LT6 269 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 MESP1Q9BRJ9 268 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 MAGEH1Q9H213 219 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 PLCB1Q9NQ66 1216 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
RTN4-211ENST00000438462 ABCA1O95477 2261 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 ASPDHA6ND91 283 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 OR5K3A6NET4 321 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 CLCA1A8K7I4 914 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 A8MV72 311 aaPredicted RBP10.7□□□□□ -0.7
RTN4-211ENST00000438462 TTI1O43156 1089 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 HSF2BPO75031 334 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 HPP00738 406 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 NR3C1P04150 777 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 RARAP10276 462 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
RTN4-211ENST00000438462 VIPR1P32241 457 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 PTGER1P34995 402 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 PTGS2P35354 604 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 SOX18P35713 384 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 PREPP48147 710 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 MAPKAPK2P49137 400 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 HMGN5P82970 282 aaKnown RBP10.7□□□□□ -0.7
RTN4-211ENST00000438462 CYTH1Q15438 398 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 RBBP7Q16576 425 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 KRT39Q6A163 491 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 TMEM270Q6UE05 265 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 FBXL13Q8NEE6 735 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 PIGTQ969N2 578 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 AP2M1Q96CW1 435 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 AGAP2Q99490 1192 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 AP1M1Q9BXS5 423 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 HES7Q9BYE0 225 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 KLC2Q9H0B6 622 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 TP63Q9H3D4 680 aaPredicted RBP10.7□□□□□ -0.7
RTN4-211ENST00000438462 GNPTGQ9UJJ9 305 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 SERTAD3Q9UJW9 196 aa10.7□□□□□ -0.7
RTN4-211ENST00000438462 PRR35P0CG20 571 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 RPL10P27635 214 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 TXLNAP40222 546 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 RGRP47804 291 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 CLCNKAP51800 687 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 KPNA2P52292 529 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 POLR2LP62875 67 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 RHBDD2Q6NTF9 364 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 CCDC73Q6ZRK6 1079 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 NLRP14Q86W24 1093 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 LIX1LQ8IVB5 337 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 PROKR1Q8TCW9 393 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 SCAMP4Q969E2 229 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 ABCG8Q9H221 673 aa10.69□□□□□ -0.7
RTN4-211ENST00000438462 MRM3Q9HC36 420 aaKnown RBP10.69□□□□□ -0.7
RTN4-211ENST00000438462 SYTL2Q9HCH5 934 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms