RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 OR2T34Q8NGX1 318 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 NAT14Q8WUY8 206 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 RLN3Q8WXF3 142 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ASB12Q8WXK4 309 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 KLK6Q92876 244 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GLYATL1Q969I3 302 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 FUBP1Q96AE4 644 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ULK4Q96C45 1275 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TOE1Q96GM8 510 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 PKNOX2Q96KN3 472 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 VPS35Q96QK1 796 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 OLFM1Q99784 485 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 AARSD1Q9BTE6 412 aaKnown RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 IER2Q9BTL4 223 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 ZSCAN5AQ9BUG6 496 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC17A9Q9BYT1 436 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 TPSD1Q9BZJ3 242 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 BTBD1Q9H0C5 482 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 STMN4Q9H169 189 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SGK2Q9HBY8 427 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SNX15Q9NRS6 342 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 WSB2Q9NYS7 404 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 GALPQ9UBC7 116 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC39A10Q9ULF5 831 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 MED16Q9Y2X0 877 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 POLR3KQ9Y2Y1 108 aaPredicted RBP6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 VWA7Q9Y334 891 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 PRSS21Q9Y6M0 314 aa6.95□□□□□ -1.3
LSM3P3-201ENST00000436601 BRWD1Q9NSI6 2320 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 IGHV1OR15-9A0A0B4J2B8 117 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 UBA6A0AVT1 1052 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM221A6NGB7 291 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 LRRC72A6NJI9 287 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 IQCF5A8MTL0 148 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 M0R296 226 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PFDN6O15212 129 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 INPP4BO15327 924 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC31A1O15431 190 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PHGDHO43175 533 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 LATO43561 262 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SGTAO43765 313 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF217O75362 1048 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 MTX2O75431 263 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 WISP3O95389 354 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SEMA4FO95754 770 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ESR1P03372 595 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PCCBP05166 539 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 IGHV4-34P06331 123 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 C2P06681 752 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PKMP14618 531 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SNRPBP14678 240 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 BRAFP15056 766 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF7P17097 686 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 KRT4P19013 534 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SAT1P21673 171 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 FDXRP22570 491 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 RPS3P23396 243 aaKnown RBP eCLIP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 OAS2P29728 719 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ATP5DP30049 168 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 CD6P30203 668 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 OXTRP30559 389 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 CCNFP41002 786 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 MAGEA9P43362 315 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 GPR1P46091 355 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SERPINB8P50452 374 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 CCR3P51677 355 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 POU4F1Q01851 419 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 GSTM4Q03013 218 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC18A2Q05940 514 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ILF2Q12905 390 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 SGCGQ13326 291 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PDE1CQ14123 709 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ITIH4Q14624 930 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 INPP5AQ14642 412 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 IRF4Q15306 451 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ZKSCAN8Q15776 578 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 KIAA0895LQ68EN5 471 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 RAET1GQ6H3X3 334 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM207Q6UWW9 146 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 MACC1Q6ZN28 852 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM74Q86UV6 250 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 RBFAQ8N0V3 343 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 C4orf33Q8N1A6 199 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 RASGEF1AQ8N9B8 481 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 BANPQ8N9N5 519 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 COX14Q96I36 57 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 LENG8Q96PV6 779 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TTC1Q99614 292 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 COPS8Q99627 209 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 LGR4Q9BXB1 951 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 TEX101Q9BY14 249 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 C6orf106Q9H6K1 298 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 EBF2Q9HAK2 575 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 KCTD5Q9NXV2 234 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms