RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MAPK10P53779 464 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 KCNK10P57789 538 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 SELPLGQ14242 412 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 NANOGP8Q6NSW7 305 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 GPSM1Q86YR5 675 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 FNDC5Q8NAU1 212 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 SEPHS2Q99611 448 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 ADI1Q9BV57 179 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 NANOGQ9H9S0 305 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 GID8Q9NWU2 228 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 THSD7BQ9C0I4 1608 aa10.28□□□□□ -0.76
CLSTN1-203ENST00000435891 SNX2O60749 519 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 VPS26AO75436 327 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 SLC22A3O75751 556 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 STC2O76061 302 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 UROSP10746 265 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 CTPS1P17812 591 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 ITGB6P18564 788 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 HRH2P25021 359 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 OR4D2P58180 307 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 ESRRGP62508 458 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 TRIM16LQ309B1 348 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 RNF219Q5W0B1 726 aaPredicted RBP10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 EGFLAMQ63HQ2 1017 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 CXorf57Q6NSI4 855 aaKnown RBP10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 TBPL2Q6SJ96 375 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 SFRP1Q8N474 314 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 OR6K2Q8NGY2 324 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 C1QTNF3Q9BXJ4 246 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 ACTL8Q9H568 366 aa10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 FAM32AQ9Y421 112 aaKnown RBP10.27□□□□□ -0.76
CLSTN1-203ENST00000435891 RNF103-CHMP3A0A140T963 221 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 CCDC154A6NI56 674 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 SYCE1LA8MT33 242 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 STX16O14662 325 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ADAM23O75077 832 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 GMNNO75496 209 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ALPIP09923 528 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 FASP25445 335 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 MZF1P28698 734 aaPredicted RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 POLR2JP52435 117 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 IL2P60568 153 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 BNIP2Q12982 314 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 INPP5AQ14642 412 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ATXN7L2Q5T6C5 722 aaPredicted RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 PRMT9Q6P2P2 845 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 GPRIN3Q6ZVF9 776 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TAS2R42Q7RTR8 314 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ZNF786Q8N393 782 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TTC30BQ8N4P2 665 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TMEM199Q8N511 208 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 NKAPQ8N5F7 415 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TRPV3Q8NET8 790 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■■■■ 54.9
CLSTN1-203ENST00000435891 GLT1D1Q96MS3 346 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 KCTD14Q9BQ13 255 aaPredicted RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 BRINP2Q9C0B6 783 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 SMPD4Q9NXE4 827 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 PDE4DIPQ5VU43 2346 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 C2orf78A6NCI8 922 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 J3QRK9 145 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 K7EPI3 171 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 SYNCRIPO60506 623 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 KATNA1O75449 491 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 EEDO75530 441 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 CAPN1P07384 714 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 GALTP07902 379 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 CNPP09543 421 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 IL10P22301 178 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 SLC11A2P49281 568 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 BCAP31P51572 246 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 DGKQP52824 942 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 MERTKQ12866 999 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 ITGADQ13349 1161 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 BORAQ6PGQ7 559 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 RNF180Q86T96 592 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 MFSD2AQ8NA29 543 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 FBXL8Q96CD0 374 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 PPM1MQ96MI6 270 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 BOCQ9BWV1 1114 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 TRIM54Q9BYV2 358 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 OSBPL6Q9BZF3 934 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 PCDHB9Q9Y5E1 797 aa10.27□□□□□ -0.77
CLSTN1-203ENST00000435891 K7ERQ8 282 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 PIK3CGP48736 1102 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 CLCN7P51798 805 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 TWF1Q12792 350 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 ATP6AP1Q15904 470 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 IRAK1BP1Q5VVH5 260 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 XKR5Q6UX68 686 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 CAMK1DQ8IU85 385 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 CYGBQ8WWM9 190 aa10.26□□□□□ -0.77
CLSTN1-203ENST00000435891 CENPNQ96H22 339 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms