RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
HMGCS1-202ENST00000433297 C14orf119Q9NWQ9 140 aa11.41□□□□□ -0.58
HMGCS1-202ENST00000433297 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 DFNA5O60443 496 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CCR1P32246 355 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 MASP1P48740 699 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CXCL9Q07325 125 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 LCP2Q13094 533 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 SEMA3BQ13214 749 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 ANKS6Q68DC2 871 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 B3GNT8Q7Z7M8 397 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 ASCC1Q8N9N2 400 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 PROKR1Q8TCW9 393 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF300Q96RE9 604 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 NT5MQ9NPB1 228 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 MGEA5O60502 916 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 GRK3P35626 688 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 SERPINH1P50454 418 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CDC20Q12834 499 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 RFPL4BQ6ZWI9 263 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 SPATA19Q7Z5L4 167 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 OSTM1Q86WC4 334 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 DCP2Q8IU60 420 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 OR2T11Q8NH01 316 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF560Q96MR9 790 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CITED4Q96RK1 184 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 TMEM246Q9BRR3 403 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 TTYH2Q9BSA4 534 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 PRKD2Q9BZL6 878 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 POLR3BQ9NW08 1133 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CARD8Q9Y2G2 431 aa11.4□□□□□ -0.58
HMGCS1-202ENST00000433297 CENPXA8MT69 81 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 AIREO43918 545 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 S1PR4O95977 384 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF286BP0CG31 522 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 G6PDP11413 515 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 MTHFD2P13995 350 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 CD6P30203 668 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 FMO4P31512 558 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 DCTP40126 519 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 CD86P42081 329 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 OR2B6P58173 313 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 TSNQ15631 228 aaKnown RBP11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ZFP69Q49AA0 526 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 SOWAHCQ53LP3 525 aaPredicted RBP11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 TPRG1LQ5T0D9 272 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 GCNT7Q6ZNI0 430 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 GDPD3Q7L5L3 318 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ADHFE1Q8IWW8 467 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 NIM1KQ8IY84 436 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 PHACTR4Q8IZ21 702 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 FLAD1Q8NFF5 587 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 YIPF6Q96EC8 236 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 KLHL5Q96PQ7 755 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 RNF167Q9H6Y7 350 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ERAP1Q9NZ08 941 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 MPP6Q9NZW5 540 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 MOSPD1Q9UJG1 213 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ADAMTS5Q9UNA0 930 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 GMPPBQ9Y5P6 360 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.59
HMGCS1-202ENST00000433297 ARVCFO00192 962 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 AP3D1O14617 1153 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 RGS10O43665 173 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 KATNA1O75449 491 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 RECQL4O94761 1208 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 OR4F21O95013 312 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 DIRAS1O95057 198 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 HPRP00739 348 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PRSS56P0CW18 603 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 GGT1P19440 569 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 IGFBP6P24592 240 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 IGFBP5P24593 272 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 TUFMP49411 452 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 COQ5Q5HYK3 327 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 RANBP10Q6VN20 620 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 NECAB2Q7Z6G3 386 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 SYVN1Q86TM6 617 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 BLOC1S5Q8TDH9 187 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PYCR2Q96C36 320 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 YME1L1Q96TA2 773 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PLSCR3Q9NRY6 295 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 USE1Q9NZ43 259 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 VAPAQ9P0L0 249 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 OPTCQ9UBM4 332 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 COMMD10Q9Y6G5 202 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ANK1P16157 1881 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ISPDA4D126 451 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 AGAP5A6NIR3 686 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 TSPAN3O60637 253 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 CYP7B1O75881 506 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 PRSS23O95084 383 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 ACOX1Q15067 660 aa11.39□□□□□ -0.59
HMGCS1-202ENST00000433297 KYAT1Q16773 422 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms