RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 OR5T3Q8NGG3 340 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 OR2L8Q8NGY9 312 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 WDR48Q8TAF3 677 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MAGEE2Q8TD90 523 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TSPAN17Q96FV3 270 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NUDT11Q96G61 164 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RAB33BQ9H082 229 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MUC13Q9H3R2 512 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 C14orf93Q9H972 538 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF230Q9UIE0 474 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NPIPA1Q9UND3 350 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CYP46A1Q9Y6A2 500 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 POLA1P09884 1462 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TUBAL3A6NHL2 446 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF185O15231 689 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PJA2O43164 708 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TBX1O43435 398 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SUN1O94901 812 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ADRB2P07550 413 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PET100P0DJ07 73 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZNF8P17098 575 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TATP17735 454 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 EEF1B2P24534 225 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 IL13P35225 146 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RFC2P35250 354 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 AHRP35869 848 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ATP5C1P36542 298 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NAGLUP54802 743 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 GTF2IP78347 998 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MRPS22P82650 360 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 GAD2Q05329 585 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TWF1Q12792 350 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 HLFQ16534 295 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLC18A3Q16572 532 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 KCTD19Q17RG1 926 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLC10A6Q3KNW5 377 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PDSS1Q5T2R2 415 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ATF7IP2Q5U623 682 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 NADSYN1Q6IA69 706 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 BRICD5Q6PL45 260 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 POTEAQ6S8J7 498 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 USP30Q70CQ3 517 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PLPPR4Q7Z2D5 763 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 ZC3HC1Q86WB0 502 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CPNE8Q86YQ8 564 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CTAGE3PQ8IX95 158 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SLC35F3Q8IY50 421 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 UNC5BQ8IZJ1 945 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SPAG16Q8N0X2 631 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 FAM13CQ8NE31 585 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 CKAP2Q8WWK9 683 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 RLN3Q8WXF3 142 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 SH3YL1Q96HL8 342 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 LGMNQ99538 433 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 IFIH1Q9BYX4 1025 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PABPC3Q9H361 631 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 DHX33Q9H6R0 707 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 LRRC40Q9H9A6 602 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 KCNK9Q9NPC2 374 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PRDM9Q9NQV7 894 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 FAM120CQ9NX05 1096 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 TAS2R1Q9NYW7 299 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 GCNT4Q9P109 453 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PALD1Q9ULE6 856 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 PLA2G4CQ9UP65 541 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 MTO1Q9Y2Z2 717 aaKnown RBP5.31□□□□□ -1.56
PTPN4-203ENST00000430976 BOLA1Q9Y3E2 137 aa5.31□□□□□ -1.56
PTPN4-203ENST00000430976 BTBD18B2RXH4 712 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CD3EAPO15446 510 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 USP2O75604 605 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GPX5O75715 221 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NOL4O94818 638 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FBXO45P0C2W1 286 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GAAP10253 952 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PLS3P13797 630 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ERCC2P18074 760 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PAICSP22234 425 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 MGAT1P26572 445 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ELK4P28324 431 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 YAP1P46937 504 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PREPP48147 710 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 NAPAP54920 295 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 FOXK2Q01167 660 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 GRIK2Q13002 908 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CBFBQ13951 182 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 BCL7AQ4VC05 210 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 PAPD7Q5XG87 772 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 OVOS1Q6IE37 1185 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SLC51AQ86UW1 340 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ADGRG5Q8IZF4 528 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 SYNPOQ8N3V7 929 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 IL17RCQ8NAC3 791 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CHURC1Q8WUH1 139 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 CAMKK2Q96RR4 588 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 ZC3H12CQ9C0D7 883 aaKnown RBP5.3□□□□□ -1.56
PTPN4-203ENST00000430976 METTL9Q9H1A3 318 aa5.3□□□□□ -1.56
PTPN4-203ENST00000430976 C19orf44Q9H6X5 657 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms