RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OGG1O15527 345 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 KLK8O60259 260 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 REC8O95072 547 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 FGBP02675 491 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ENO3P13929 434 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CSF2RAP15509 400 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 EDN2P20800 178 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CPT2P23786 658 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 PTAFRP25105 342 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 PRCPP42785 496 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 SARNPP82979 210 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CBX1P83916 185 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 DGCR2P98153 550 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 TWISTNBQ3B726 338 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CDONQ4KMG0 1287 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 AWAT1Q58HT5 328 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 EARS2Q5JPH6 523 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 KIAA1614Q5VZ46 1190 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 DHRS7BQ6IAN0 325 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 DCLRE1AQ6PJP8 1040 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 PET117Q6UWS5 81 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 QSOX2Q6ZRP7 698 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 FAM57BQ71RH2 274 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ERN2Q76MJ5 926 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 TRILQ7L0X0 811 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CHSY1Q86X52 802 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 SFTPA2Q8IWL1 248 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 DDIASQ8IXT1 998 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 HUS1BQ8NHY5 278 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 OSR1Q8TAX0 266 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 TMEM163Q8TC26 289 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 PIGOQ8TEQ8 1089 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ATOH1Q92858 354 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 VCPIP1Q96JH7 1222 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ZFYVE19Q96K21 471 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 PAFAH2Q99487 392 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 DUSP26Q9BV47 211 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 MRPL9Q9BYD2 267 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 NUF2Q9BZD4 464 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 SUDS3Q9H7L9 328 aaPredicted RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 MMRN2Q9H8L6 949 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 MBNL1Q9NR56 388 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 FLRT1Q9NZU1 646 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 SERGEFQ9UGK8 458 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 AGO2Q9UKV8 859 aaKnown RBP4.1□□□□□ -1.75
HMGB3-203ENST00000430118 TBX21Q9UL17 535 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 MTCH2Q9Y6C9 303 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 MROH7-TTC4A0A0A0MT08 1334 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 ELP1O95163 1332 aa4.1□□□□□ -1.75
HMGB3-203ENST00000430118 USP34Q70CQ2 3546 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 C2CD4BA6NLJ0 364 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 MPHOSPH10O00566 681 aaKnown RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 PRRG2O14669 202 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 PROP1O75360 226 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 MOSPD3O75425 235 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 NDUFB4O95168 129 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 SIX3O95343 332 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 BAG3O95817 575 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 ATP6V1B1P15313 513 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 TACR2P21452 398 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 MYF6P23409 242 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 HOXC8P31273 242 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CASQ1P31415 396 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 RFC1P35251 1148 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 BUD31P41223 144 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 RAB28P51157 221 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CCR3P51677 355 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 GPR143P51810 404 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 ACLYP53396 1101 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CSE1LP55060 971 aaKnown RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 TUBA4AP68366 448 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 IRX1P78414 480 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 PPARDQ03181 441 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 FAM27E3Q08E93 113 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 ESCO2Q56NI9 601 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 SGO1Q5FBB7 561 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 KRBOX4Q5JUW0 171 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 NUGGCQ68CJ6 796 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CACNA2D4Q7Z3S7 1137 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 RBFAQ8N0V3 343 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CCAR2Q8N163 923 aaKnown RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 SCCPDHQ8NBX0 429 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 HJURPQ8NCD3 748 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 OR10S1Q8NGN2 331 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 RASSF8Q8NHQ8 419 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 GOT1L1Q8NHS2 421 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 KIF18AQ8NI77 898 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 ARNTL2Q8WYA1 636 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 MAP4K1Q92918 833 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 C20orf173Q96LM9 149 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 C12orf42Q96LP6 360 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 NUDCD1Q96RS6 583 aa4.09□□□□□ -1.75
HMGB3-203ENST00000430118 CITED2Q99967 270 aaPredicted RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 WDR83Q9BRX9 315 aaKnown RBP4.09□□□□□ -1.75
HMGB3-203ENST00000430118 RTN4RQ9BZR6 473 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms