RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 IGSF5Q9NSI5 407 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 EHD3Q9NZN3 535 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 CLDN11O75508 207 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 SCELO95171 688 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 IGSF6O95976 241 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 CD1DP15813 335 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 GDF5P43026 501 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 KIR3DL1P43629 444 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ALDH9A1P49189 494 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 STC1P52823 247 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ARSFP54793 590 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 DMPKQ09013 629 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF284Q2VY69 593 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 R3HCC1LQ7Z5L2 792 aaKnown RBP12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 BBS7Q8IWZ6 715 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 FNDC8Q8TC99 324 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 NDEL1Q9GZM8 345 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ZFYVE1Q9HBF4 777 aa12.47□□□□□ -0.41
CPNE4-201ENST00000429747 ACSL4O60488 711 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SERPINA4P29622 427 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 CREB5Q02930 508 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 RANBP10Q6VN20 620 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 ANKFN1Q8N957 763 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 PDPRQ8NCN5 879 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SOCS4Q8WXH5 440 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 TOR3AQ9H497 397 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 TUBA8Q9NY65 449 aaPredicted RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 EVLQ9UI08 416 aaPredicted RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 NHSQ6T4R5 1651 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 PNMA8CA0A1B0GUJ8 204 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SLC26A3P40879 764 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 MS4A13Q5J8X5 152 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 LSMEM2Q8N112 164 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 PIK3C3Q8NEB9 887 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 IMP4Q96G21 291 aaKnown RBP12.46□□□□□ -0.41
CPNE4-201ENST00000429747 COPS8Q99627 209 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 MAGEH1Q9H213 219 aa12.46□□□□□ -0.41
CPNE4-201ENST00000429747 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 BMP10O95393 424 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 IFNA14P01570 189 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 ESR1P03372 595 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 PRSS56P0CW18 603 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 KRT20P35900 424 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 MAPKAPK2P49137 400 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 KCNQ1P51787 676 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 C6orf136Q5SQH8 315 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 ATG14Q6ZNE5 492 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 UBE2R2Q712K3 238 aaPredicted RBP12.46□□□□□ -0.42
CPNE4-201ENST00000429747 SERPINA9Q86WD7 417 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 TTC30BQ8N4P2 665 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 GANCQ8TET4 914 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 SMAD5Q99717 465 aaKnown RBP12.46□□□□□ -0.42
CPNE4-201ENST00000429747 NMUR1Q9HB89 426 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 MIOSQ9NXC5 875 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.42
CPNE4-201ENST00000429747 CNOT11Q9UKZ1 510 aaKnown RBP12.46□□□□□ -0.42
CPNE4-201ENST00000429747 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.42
CPNE4-201ENST00000429747 LCHNA4D1U4 455 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 FFAR2O15552 330 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 GSTM1P09488 218 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 OR1D2P34982 312 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 ATP4BP51164 291 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 ALDH3A2P51648 485 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 FOXA1P55317 472 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 FOXM1Q08050 763 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 TAF1AQ15573 450 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-201ENST00000429747 OR4D1Q15615 310 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 XKR6Q5GH73 641 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 ATXN7L2Q5T6C5 722 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-201ENST00000429747 CLEC14AQ86T13 490 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 CENPSQ8N2Z9 138 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 CLDN19Q8N6F1 224 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 BRI3BPQ8WY22 251 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 MTERF3Q96E29 417 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 ZNF597Q96LX8 424 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
CPNE4-201ENST00000429747 KLHL3Q9UH77 587 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 OGDHLQ9ULD0 1010 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 BTBD3Q9Y2F9 522 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 VILLO15195 856 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 UGT2B11O75310 529 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 CNMDO75829 334 aa12.45□□□□□ -0.42
CPNE4-201ENST00000429747 PAPSS2O95340 614 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-201ENST00000429747 VARSP26640 1264 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms