RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TFAP2CQ92754 450 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC35B4Q969S0 331 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 TMEM176AQ96HP8 235 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 COG8Q96MW5 612 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 CGRRF1Q99675 332 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 OCSTAMPQ9BR26 566 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 KIF25Q9UIL4 384 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 MOSPD1Q9UJG1 213 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 DAG1Q14118 895 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 PTAR1Q7Z6K3 402 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 DNAJB3Q8WWF6 145 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 GLT1D1Q96MS3 346 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 ACE2Q9BYF1 805 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 RNF32Q9H0A6 362 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 PCDHGB1Q9Y5G3 927 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 USP54Q70EL1 1684 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 ALPK2Q86TB3 2170 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 MYO1GB0I1T2 1018 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 HTRA2O43464 458 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 NDUFS3O75489 264 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 CD2P06729 351 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 CKMT1AP12532 417 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 BMPR2Q13873 1038 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 DPYSL3Q14195 570 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 POU6F1Q14863 301 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 DUSP7Q16829 419 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 TEX30Q5JUR7 227 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 RPL13AP3Q6NVV1 102 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 SIAH1Q8IUQ4 282 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 WDSUB1Q8N9V3 476 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 RHOXF1Q8NHV9 184 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 DCAKDQ8WVC6 231 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 MECRQ9BV79 373 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 EMC7Q9NPA0 242 aa7.45□□□□□ -1.22
SYNPO2-202ENST00000429713 G3V2T6 193 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 NR5A2O00482 541 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZSWIM2Q8NEG5 633 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ACP6Q9NPH0 428 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CHST12Q9NRB3 414 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PRMT7Q9NVM4 692 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CLDN24A6NM45 220 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CPN2P22792 545 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 HLA-DMAP28067 261 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TOR1AIP1Q5JTV8 583 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SZRD1Q7Z422 152 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC39A7Q92504 469 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TEFMQ96QE5 360 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RNPEPQ9H4A4 650 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNRF3Q9ULT6 936 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 NCKAP1Q9Y2A7 1128 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF487B1APH4 448 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 HUNKP57058 714 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 GTF3C1Q12789 2109 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 USF2Q15853 346 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SETMARQ53H47 684 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PYDC2Q56P42 97 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 METTL4Q8N3J2 472 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 COLGALT1Q8NBJ5 622 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 NDFIP2Q9NV92 336 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CUEDC1Q9NWM3 386 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 LYARQ9NX58 379 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MSI1O43347 362 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 HS6ST1O60243 411 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 JUNP05412 331 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 AIF1P55008 147 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC25A3Q00325 362 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF235Q14590 738 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 MRNIPQ6NTE8 343 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PEG10Q86TG7 708 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 VWA5B2Q8N398 1253 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC38A2Q96QD8 506 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 TMEM39BQ9GZU3 492 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLITRK2Q9H156 845 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SMIM22K7EJ46 135 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PHYHO14832 338 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SLC2A3P11169 496 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 CDH13P55290 713 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 FMO1Q01740 532 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SNAPC2Q13487 334 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 GPAT3Q53EU6 434 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RAB41Q5JT25 222 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 KHDRBS2Q5VWX1 349 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZSCAN18Q8TBC5 510 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 SMAP2Q8WU79 429 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 OR51E2Q9H255 320 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF358Q9NW07 568 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 PAK1IP1Q9NWT1 392 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 C1orf109Q9NX04 203 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 DUSP12Q9UNI6 340 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 OGTO15294 1046 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 RAD1O60671 282 aa7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 ERN1O75460 977 aaKnown RBP7.44□□□□□ -1.22
SYNPO2-202ENST00000429713 P2RX3P56373 397 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms