RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 APRTP07741 180 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 FOXN2P32314 431 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 ZRANB3Q5FWF4 1079 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 SNAP47Q5SQN1 464 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 ZNF534Q76KX8 674 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 ZFAND4Q86XD8 727 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 TRIM48Q8IWZ4 208 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 RASGEF1CQ8N431 466 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 CLDN19Q8N6F1 224 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 DNAAF3Q8N9W5 541 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 AVL9Q8NBF6 648 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 RMDN2Q96LZ7 410 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 INSM2Q96T92 566 aaPredicted RBP17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 DPH1Q9BZG8 443 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 WWP1Q9H0M0 922 aa17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 CFAP20Q9Y6A4 193 aaKnown RBP17.72■□□□□ 0.43
SSR4P1-202ENST00000429427 A8MU76 341 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 EFSO43281 561 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 NRDCO43847 1150 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 UBXN7O94888 489 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 C9P02748 559 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 ATP1B2P14415 290 aaPredicted RBP17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 LEPRP48357 1165 aaKnown RBP17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 PPP1CAP62136 330 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 ACVR1Q04771 509 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 CACNG1Q06432 222 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 AGBL5Q8NDL9 886 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 CXorf40BQ96DE9 158 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 FCRL3Q96P31 734 aaPredicted RBP17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 RANBP9Q96S59 729 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 EIF2B3Q9NR50 452 aaKnown RBP17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 KLHL3Q9UH77 587 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 JRKLQ9Y4A0 524 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 PRSS21Q9Y6M0 314 aa17.71■□□□□ 0.43
SSR4P1-202ENST00000429427 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.42
SSR4P1-202ENST00000429427 SDK2Q58EX2 2172 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 ATRXP46100 2492 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 TCRBV7S3A2A0A539 114 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 USP27XA6NNY8 438 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 E7EVH7 732 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 MTHFD1P11586 935 aaKnown RBP17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 CAPZBP47756 277 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 TSTD2Q5T7W7 516 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 TAS2R42Q7RTR8 314 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 DTX1Q86Y01 620 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 SLC35F6Q8N357 371 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 COG1Q8WTW3 980 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 ART4Q93070 314 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 DCUN1D1Q96GG9 259 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 EPB41L1Q9H4G0 881 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 SIDT1Q9NXL6 827 aaKnown RBP17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 TCAF1Q9Y4C2 921 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 PCDHGA3Q9Y5H0 932 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 B3GALT1Q9Y5Z6 326 aa17.7■□□□□ 0.42
SSR4P1-202ENST00000429427 HEATR9A2RTY3 570 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 EFCAB7A8K855 629 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 B4E171 279 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 KIF1CO43896 1103 aaKnown RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 POLBP06746 335 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 CSTF2P33240 577 aaKnown RBP eCLIP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 TSPAN7P41732 249 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 HALP42357 657 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 LMAN1P49257 510 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 PPM1FP49593 454 aaPredicted RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 CXADRP78310 365 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 CRADDP78560 199 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 SEMA3AQ14563 771 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 SKIDA1Q1XH10 827 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 SOWAHCQ53LP3 525 aaPredicted RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 CAPRIN2Q6IMN6 1127 aaKnown RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 RBM12BQ8IXT5 1001 aaKnown RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 CFAP206Q8IYR0 622 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 HM13Q8TCT9 377 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 MAIP1Q8WWC4 291 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 HDAC10Q969S8 669 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 C9orf72Q96LT7 481 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 NRTNQ99748 197 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 AP1M1Q9BXS5 423 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 IMP3Q9NV31 184 aaKnown RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 RIMKLBQ9ULI2 386 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 TTC7AQ9ULT0 858 aaPredicted RBP17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 NEU2Q9Y3R4 380 aa17.69■□□□□ 0.42
SSR4P1-202ENST00000429427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 CAPN5O15484 640 aaPredicted RBP17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 OR1I1O60431 355 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 GOT2P00505 430 aaKnown RBP17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 ANKRD34CP0C6C1 535 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 RALBP11234 206 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 ADRA1DP25100 572 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 PDHA2P29803 388 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 BASP1P80723 227 aaKnown RBP17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 ANKS6Q68DC2 871 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 PCSK4Q6UW60 755 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 GSTA5Q7RTV2 222 aa17.68■□□□□ 0.42
SSR4P1-202ENST00000429427 FAM129CQ86XR2 697 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms