RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 BOCQ9BWV1 1114 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 OSBPL11Q9BXB4 747 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ZBP1Q9H171 429 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CCM2LQ9NUG4 571 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 CMTM6Q9NX76 183 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PLK2Q9NYY3 685 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 NDUFA13Q9P0J0 144 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 KLHL42Q9P2K6 505 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ANGPTL3Q9Y5C1 460 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PCDHA9Q9Y5H5 950 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ST14Q9Y5Y6 855 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 DHRS12A0PJE2 317 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 C9JVG2 144 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 LEFTY2O00292 366 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 OR7A17O14581 309 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 AKAP10O43572 662 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 AHCYL1O43865 530 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 GPIP06744 558 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 FESP07332 822 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SPATA31D3P0C874 917 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 FCGR1AP12314 374 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 BMP2P12643 396 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ZNF26P17031 533 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 CD70P32970 193 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PIK3CGP48736 1102 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 EEFSECP57772 596 aaKnown RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 UFM1P61960 85 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 EMX2Q04743 252 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 NR6A1Q15406 480 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SMU1Q2TAY7 513 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SCIMPQ6UWF3 145 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 SPATA31D4Q6ZUB0 917 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 TPRG1Q6ZUI0 275 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 MILR1Q7Z6M3 343 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ZFAND4Q86XD8 727 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 OR4F6Q8NGB9 312 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 TMEM125Q96AQ2 219 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 PPP3R2Q96LZ3 170 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 CDK15Q96Q40 435 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 ALG2Q9H553 416 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 IPPKQ9H8X2 491 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 WWOXQ9NZC7 414 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 OPTCQ9UBM4 332 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
THBS3-202ENST00000428962 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
THBS3-202ENST00000428962 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 A0A1W2PQ67 120 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 KANSL1LA0AUZ9 987 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 ADH1AP07327 375 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 C8AP07357 584 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 CNPP09543 421 aaKnown RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 ITGB6P18564 788 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 GKP32189 559 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 NSG1P42857 185 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 ZFP36L2P47974 494 aaKnown RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 TRAF3Q13114 568 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 MAD2L1Q13257 205 aaPredicted RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 TBCELQ5QJ74 424 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 GPRC6AQ5T6X5 926 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 FOXB2Q5VYV0 432 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 C22orf39Q6P5X5 142 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 GALNT13Q8IUC8 556 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 PACRGLQ8N7B6 248 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 LKAAEAR1Q8TD35 194 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 APOL5Q9BWW9 433 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 CEP44Q9C0F1 390 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 SEMA6AQ9H2E6 1030 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 NSUN3Q9H649 340 aaKnown RBP13.47□□□□□ -0.25
THBS3-202ENST00000428962 ZNF696Q9H7X3 374 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 C8orf4Q9NR00 106 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 LATS2Q9NRM7 1088 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 HS3ST2Q9Y278 367 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
THBS3-202ENST00000428962 SMIM31A0A1B0GVY4 71 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 A0A1W2PRU2 124 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 ASPDHA6ND91 283 aa13.46□□□□□ -0.25
THBS3-202ENST00000428962 NPIPB15A6NHN6 443 aaPredicted RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 LSM1O15116 133 aaKnown RBP13.46□□□□□ -0.25
THBS3-202ENST00000428962 ARPC2O15144 300 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms