RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 COG4Q9H9E3 785 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 POPDC3Q9HBV1 291 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 LATS2Q9NRM7 1088 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPR27Q9NS67 375 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 TM7SF3Q9NS93 570 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SENP1Q9P0U3 644 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 GALPQ9UBC7 116 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 RAPGEFL1Q9UHV5 662 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PILRBQ9UKJ0 227 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPR34Q9UPC5 381 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 KCNK6Q9Y257 313 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ANKRD6Q9Y2G4 727 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 MED16Q9Y2X0 877 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 ACOT9Q9Y305 439 aa7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PCYT1BQ9Y5K3 369 aaPredicted RBP7.78□□□□□ -1.16
HMGA1P4-201ENST00000428643 PDZK1P1A8MUH7 402 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 HMGB1P1B2RPK0 211 aaPredicted RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 H3BM21 787 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 COPEO14579 308 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 LIN7AO14910 233 aaPredicted RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 KPNA5O15131 536 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SNX2O60749 519 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TNFP01375 233 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 C2P06681 752 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 GSTM1P09488 218 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC35G4P0C7Q5 338 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCDC166P0CW27 439 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 CTSEP14091 401 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 DGKAP23743 735 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 AOAHP28039 575 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 HPDP32754 393 aaPredicted RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 HOXD12P35452 270 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 GMPRP36959 345 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCNFP41002 786 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 MAGEA12P43365 314 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 BLKP51451 505 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 HK3P52790 923 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 IL2P60568 153 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARHGAP8P85298 464 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 IRF9Q00978 393 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TIAL1Q01085 375 aaKnown RBP eCLIP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 GSTM4Q03013 218 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 EIF2B5Q13144 721 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 LRP8Q14114 963 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 NFE2L1Q14494 772 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 NUMA1Q14980 2115 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SEPT7Q16181 437 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TTMPQ5BVD1 217 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACSBG2Q5FVE4 666 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLEKHS1Q5SXH7 462 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC30A9Q6PML9 568 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PAQR3Q6TCH7 311 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TIFABQ6ZNK6 161 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM83HQ6ZRV2 1179 aaPredicted RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PIWIL4Q7Z3Z4 852 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCDC91Q7Z6B0 441 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 RABEPKQ7Z6M1 372 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 C11orf96Q7Z7L8 435 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SPATS2Q86XZ4 545 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 CFAP206Q8IYR0 622 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 MYO1HQ8N1T3 1032 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SPATA6LQ8N4H0 392 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR2L2Q8NH16 312 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACMSDQ8TDX5 336 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 KCTD4Q8WVF5 259 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 ASZ1Q8WWH4 475 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 GLMNQ92990 594 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TLCD1Q96CP7 247 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SCARF2Q96GP6 870 aaPredicted RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 APOPT1Q96IL0 206 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SCYL1Q96KG9 808 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PKNOX2Q96KN3 472 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC30A3Q99726 388 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRRX2Q99811 253 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SELENOSQ9BQE4 189 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TIMM29Q9BSF4 260 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 UNKQ9C0B0 810 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 SYTL2Q9HCH5 934 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 MED4Q9NPJ6 270 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLC4Q9NSK0 619 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 TMEM74BQ9NUR3 256 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 APOBEC3BQ9UH17 382 aaKnown RBP7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 DHRS7Q9Y394 339 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 DGKBQ9Y6T7 804 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 KMT2EQ8IZD2 1858 aa7.77□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLHL33A6NCF5 533 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 NPEPPSL1A6NEC2 478 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 GLRA3O75311 464 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 SPAG7O75391 227 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 EPN2O95208 641 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TOP3BO95985 862 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 FUCA1P04066 466 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 LTA4HP09960 611 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CBSLP0DN79 551 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ENO3P13929 434 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 BRAFP15056 766 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 NME1P15531 152 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms