RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 RAD18Q9NS91 495 aa10.04□□□□□ -0.8
HDLBP-216ENST00000428482 OCIAD1Q9NX40 245 aa10.04□□□□□ -0.8
HDLBP-216ENST00000428482 IL1RAPL1Q9NZN1 696 aa10.04□□□□□ -0.8
HDLBP-216ENST00000428482 CPNE7Q9UBL6 633 aa10.04□□□□□ -0.8
HDLBP-216ENST00000428482 ZNF148Q9UQR1 794 aa10.04□□□□□ -0.8
HDLBP-216ENST00000428482 AAR2Q9Y312 384 aaKnown RBP10.04□□□□□ -0.8
HDLBP-216ENST00000428482 MN1Q10571 1320 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-216ENST00000428482 TRBV5-4A0A0C4DH59 114 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 KRT87PA6NCN2 255 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 A8MU76 341 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 KMOO15229 486 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 DUX1O43812 170 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CPNE6O95741 557 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 APRTP07741 180 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PNLIPP16233 465 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 MSH3P20585 1137 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ACRV1P26436 265 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ATRXP46100 2492 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PRLHRP49683 370 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CLCNKAP51800 687 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 C2orf54Q08AI8 447 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CLN3Q13286 438 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 BIRC2Q13490 618 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ITGA9Q13797 1035 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 LDLRAP1Q5SW96 308 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 DUPD1Q68J44 220 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 C8orf74Q6P047 294 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CERS6Q6ZMG9 384 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CLEC14AQ86T13 490 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 LDB1Q86U70 411 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 SERPINA9Q86WD7 417 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 AGGF1Q8N302 714 aaeCLIP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 MPP5Q8N3R9 675 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 FBXO39Q8N4B4 442 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 WDR36Q8NI36 951 aaKnown RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 BRSK1Q8TDC3 778 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PPM1MQ96MI6 270 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CTRCQ99895 268 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PARD6BQ9BYG5 372 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 WWP1Q9H0M0 922 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 DDX47Q9H0S4 455 aaKnown RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 SARS2Q9NP81 518 aaKnown RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CASS4Q9NQ75 786 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 NLE1Q9NVX2 485 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 SYBUQ9NX95 663 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 MARCH4Q9P2E8 410 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
HDLBP-216ENST00000428482 TCAF1Q9Y4C2 921 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
HDLBP-216ENST00000428482 IGLV3-16A0A075B6K0 115 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 TEX51A0A1B0GUA7 166 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 CCDC151A5D8V7 595 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 MROH6A6NGR9 719 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 LILRA5A6NI73 299 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 C2orf81A6NN90 581 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 NDC80O14777 642 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 KIF1CO43896 1103 aaKnown RBP10.02□□□□□ -0.81
HDLBP-216ENST00000428482 VEGFDO43915 354 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 OR1I1O60431 355 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 POP7O75817 140 aaKnown RBP10.02□□□□□ -0.81
HDLBP-216ENST00000428482 SUN1O94901 812 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 GOT2P00505 430 aaKnown RBP10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ITGA2BP08514 1039 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ITGB6P18564 788 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ITGALP20701 1170 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 MGAT1P26572 445 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ARNTP27540 789 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 SLC5A2P31639 672 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 CAPZBP47756 277 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 SESN2P58004 480 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-216ENST00000428482 DR1Q01658 176 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 DMPKQ09013 629 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 BRD3Q15059 726 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 BCL7AQ4VC05 210 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 FBXO38Q6PIJ6 1188 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 CES3Q6UWW8 571 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 TMEM26Q6ZUK4 368 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 SNX20Q7Z614 316 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ZFAND4Q86XD8 727 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 FAM129CQ86XR2 697 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 CLDN19Q8N6F1 224 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 CCDC89Q8N998 374 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 LMNTD1Q8N9Z9 388 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 OR6C4Q8NGE1 309 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 WDR48Q8TAF3 677 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 ZNF398Q8TD17 642 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 KCNE4Q8WWG9 221 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 FCRL3Q96P31 734 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-216ENST00000428482 TGM7Q96PF1 710 aa10.02□□□□□ -0.81
HDLBP-216ENST00000428482 FERMT1Q9BQL6 677 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms