RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CAPZBP47756 277 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 TTPAP49638 278 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MAZP56270 477 aaKnown RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MAP7Q14244 749 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MAP9Q49MG5 647 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 RNF187Q5TA31 235 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 TMEM220Q6QAJ8 160 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 LRRC69Q6ZNQ3 347 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 NYAP1Q6ZVC0 841 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MARK2Q7KZI7 788 aaKnown RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 PRSS42Q7Z5A4 293 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 PCGF5Q86SE9 256 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 HOOK3Q86VS8 718 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 OR13C4Q8NGS5 318 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 GPR150Q8NGU9 434 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 GDAP1Q8TB36 358 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 C1orf54Q8WWF1 131 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 WBP1Q96G27 269 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 ATXN7L3BQ96GX2 97 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 NAT9Q9BTE0 207 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 TSSK1BQ9BXA7 367 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 CHRNA10Q9GZZ6 450 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 KCNF1Q9H3M0 494 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 MVB12BQ9H7P6 319 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 C10orf88Q9H8K7 445 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 SYTL2Q9HCH5 934 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 BPIFA1Q9NP55 256 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 FBXO8Q9NRD0 319 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF624Q9P2J8 865 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 KLHL42Q9P2K6 505 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 SLC23A2Q9UGH3 650 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 FKBPLQ9UIM3 349 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 KCNK6Q9Y257 313 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 PCDHB1Q9Y5F3 818 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 PCYT1BQ9Y5K3 369 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-203ENST00000428014 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 COLEC10Q9Y6Z7 277 aa8.96□□□□□ -0.98
SMC1A-203ENST00000428014 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 IGHV5-10-1A0A0J9YXX1 117 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 H3BMM5 538 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A9O60656 530 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 PHF2O75151 1096 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 FKBP9O95302 570 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 OR56A5P0C7T3 313 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A6P19224 532 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A1P22309 533 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A4P22310 534 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 RPS3P23396 243 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 ALDH4A1P30038 563 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 AKT1P31749 480 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A3P35503 534 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A5P35504 534 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 COILP38432 576 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CTSCP53634 463 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC173Q0VFZ6 552 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 KCNJ11Q14654 390 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC157Q569K6 752 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 KIAA0930Q6ICG6 404 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC137Q6PK04 289 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 PPP1R21Q6ZMI0 780 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF574Q6ZN55 896 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 GSTA5Q7RTV2 222 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 TMEM135Q86UB9 458 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 SERPINA9Q86WD7 417 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 FBXO39Q8N4B4 442 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 PPHLN1Q8NEY8 458 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 OR52K1Q8NGK4 314 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 OR4L1Q8NH43 312 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 MDM1Q8TC05 714 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UBXN4Q92575 508 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 MAGOHBQ96A72 148 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CXorf40BQ96DE9 158 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 ZDHHC12Q96GR4 267 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 AHCYL2Q96HN2 611 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 DNAJC1Q96KC8 554 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 TAAR9Q96RI9 348 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 FAM118BQ9BPY3 351 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 CARD6Q9BX69 1037 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 TRIT1Q9H3H1 467 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 TFB2MQ9H5Q4 396 aaKnown RBP8.95□□□□□ -0.98
SMC1A-203ENST00000428014 KIR3DX1Q9H7L2 352 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A7Q9HAW7 530 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A10Q9HAW8 530 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 UGT1A8Q9HAW9 530 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 PRDM8Q9NQV8 689 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 LATS2Q9NRM7 1088 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 SATB2Q9UPW6 733 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 KIF26BQ2KJY2 2108 aa8.95□□□□□ -0.98
SMC1A-203ENST00000428014 FAM237BA0A1B0GVD1 139 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 A0A1W2PNU3 283 aaPredicted RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PDZK1P1A8MUH7 402 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 UBXN7O94888 489 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 EML2O95834 649 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 RECKO95980 971 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 TUBB4AP04350 444 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 SLC35G4P0C7Q5 338 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms