RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FAM92BQ6ZTR7 304 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 RBM12BQ8IXT5 1001 aaKnown RBP18.02■□□□□ 0.48
PSPC1-202ENST00000427943 SLC35B2Q8TB61 432 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 ATG4AQ8WYN0 398 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 LRRC45Q96CN5 670 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 DNAJC1Q96KC8 554 aaKnown RBP18.02■□□□□ 0.48
PSPC1-202ENST00000427943 WWP1Q9H0M0 922 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 ARNT2Q9HBZ2 717 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 PIH1D1Q9NWS0 290 aaKnown RBP18.02■□□□□ 0.48
PSPC1-202ENST00000427943 PILRAQ9UKJ1 303 aa18.02■□□□□ 0.48
PSPC1-202ENST00000427943 DNMT3AQ9Y6K1 912 aaPredicted RBP18.02■□□□□ 0.48
PSPC1-202ENST00000427943 MGAT4DA6NG13 374 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 POLR1CO15160 346 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 LDB2O43679 373 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 SGTAO43765 313 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 STK17BO94768 372 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 MTHFD1P11586 935 aaKnown RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 TPH1P17752 444 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 ITGALP20701 1170 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 MC4RP32245 332 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 SH3BP2P78314 561 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 POU6F1Q14863 301 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 PLCL1Q15111 1095 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 BCL7AQ4VC05 210 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 METRNLQ641Q3 311 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 XKR5Q6UX68 686 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 TIPARPQ7Z3E1 657 aaKnown RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 NLGN4XQ8N0W4 816 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 NXPE1Q8N323 547 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 LILRA3Q8N6C8 439 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 NLGN4YQ8NFZ3 816 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 MED8Q96G25 268 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 DCUN1D1Q96GG9 259 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF514Q96K75 400 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 C12orf66Q96MD2 445 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 ARHGAP9Q9BRR9 750 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 SPRY4Q9C004 299 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF768Q9H5H4 540 aaKnown RBP18.01■□□□□ 0.47
PSPC1-202ENST00000427943 LRRC40Q9H9A6 602 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 GUCA1BQ9UMX6 200 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF462Q96JM2 2506 aa18.01■□□□□ 0.47
PSPC1-202ENST00000427943 CCDC78A2IDD5 438 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 AGAP14A8MT82 685 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 PRSS56P0CW18 603 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 HADHAP40939 763 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 CDKN1CP49918 316 aaPredicted RBP18■□□□□ 0.47
PSPC1-202ENST00000427943 P3H1Q32P28 736 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 ZRANB3Q5FWF4 1079 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 SEL1L2Q5TEA6 688 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 CACHD1Q5VU97 1274 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 PRSS42Q7Z5A4 293 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 SNX20Q7Z614 316 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 UNC5BQ8IZJ1 945 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 EXD3Q8N9H8 876 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 SPDYE1Q8NFV5 336 aaPredicted RBP18■□□□□ 0.47
PSPC1-202ENST00000427943 OR2L2Q8NH16 312 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 ULK4Q96C45 1275 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 ELMO2Q96JJ3 720 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 OR6C1Q96RD1 312 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 INSM2Q96T92 566 aaPredicted RBP18■□□□□ 0.47
PSPC1-202ENST00000427943 ZPBPQ9BS86 351 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 SLC12A9Q9BXP2 914 aa18■□□□□ 0.47
PSPC1-202ENST00000427943 FEZ2Q9UHY8 353 aaPredicted RBP18■□□□□ 0.47
PSPC1-202ENST00000427943 TMEM184BQ9Y519 407 aaPredicted RBP18■□□□□ 0.47
PSPC1-202ENST00000427943 LOC101059948A0A1B0GTJ6 334 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 TOX3O15405 576 aaPredicted RBP17.99■□□□□ 0.47
PSPC1-202ENST00000427943 POLBP06746 335 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 SLC35G4P0C7Q5 338 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 FAM87AP0C7U9 286 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 RALBP11234 206 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 PRLHRP49683 370 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 TBR1Q16650 682 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF605Q86T29 641 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 ZDHHC12Q96GR4 267 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 COPS8Q99627 209 aa17.99■□□□□ 0.47
PSPC1-202ENST00000427943 CFAP99D6REC4 459 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 AP2A1O95782 977 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 DLGAP3O95886 979 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 ITGB2P05107 769 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 PLA2G2AP14555 144 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 ZNF28P17035 718 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 CFAP206Q8IYR0 622 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 RNF10Q8N5U6 811 aaKnown RBP17.98■□□□□ 0.47
PSPC1-202ENST00000427943 LINC00615Q96LM1 132 aaPredicted RBP17.98■□□□□ 0.47
PSPC1-202ENST00000427943 ULBP3Q9BZM4 244 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 GPN2Q9H9Y4 310 aaPredicted RBP17.98■□□□□ 0.47
PSPC1-202ENST00000427943 NLE1Q9NVX2 485 aaPredicted RBP17.98■□□□□ 0.47
PSPC1-202ENST00000427943 EPHA6Q9UF33 1036 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 BOD1L1Q8NFC6 3051 aa17.98■□□□□ 0.47
PSPC1-202ENST00000427943 HELZ2Q9BYK8 2649 aaKnown RBP17.98■□□□□ 0.47
PSPC1-202ENST00000427943 LIASO43766 372 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 KRT86O43790 486 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 ATP1B2P14415 290 aaPredicted RBP17.97■□□□□ 0.47
PSPC1-202ENST00000427943 ACRV1P26436 265 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 MAP4P27816 1152 aaKnown RBP17.97■□□□□ 0.47
PSPC1-202ENST00000427943 GSE1Q14687 1217 aa17.97■□□□□ 0.47
PSPC1-202ENST00000427943 TAS2R42Q7RTR8 314 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms