RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 GUF1Q8N442 669 aaKnown RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 AFAP1Q8N556 730 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 GBGT1Q8N5D6 347 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 GCSAMQ8N6F7 178 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 CCDC191Q8NCU4 936 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 OR52I2Q8NH67 350 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 WDR20Q8TBZ3 569 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 PTPMT1Q8WUK0 201 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 ZFAND2BQ8WV99 257 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 SNRNP27Q8WVK2 155 aaKnown RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 DNASE2BQ8WZ79 361 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 SEMA4DQ92854 862 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 CNDP2Q96KP4 475 aaKnown RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 FAM81BQ96LP2 452 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 TTC14Q96N46 770 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 IL17FQ96PD4 163 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 DGAT2Q96PD7 388 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 GFI1Q99684 422 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 FNDC11Q9BVV2 318 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 C1QTNF4Q9BXJ3 329 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 MMP27Q9H306 513 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 DENND2DQ9H6A0 471 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 TRPC7Q9HCX4 862 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 TCP11L1Q9NUJ3 509 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 TXLNGQ9NUQ3 528 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 TRMT1Q9NXH9 659 aaKnown RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 RCC2Q9P258 522 aaKnown RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 NFKBIL1Q9UBC1 381 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-208ENST00000427110 NRBP1Q9UHY1 535 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 ICAM5Q9UMF0 924 aa2.36□□□□□ -2.03
PTPRC-208ENST00000427110 IGHV4OR15-8A0A075B7B6 117 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 A0A1B0GUV1 79 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 A0A1W2PP11 408 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 OR2M5A3KFT3 312 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 LILRA5A6NI73 299 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ANKRD66B4E2M5 251 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF587BE7ETH6 402 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 DVL1O14640 695 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 SSX4O60224 188 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 DIAPH2O60879 1101 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 GGPS1O95749 300 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 APOA4P06727 396 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ADRB2P07550 413 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 HLA-DOBP13765 273 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 IL11P20809 199 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 GABRA5P31644 462 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 AHRP35869 848 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TERF1P54274 439 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 DVL1P1P54792 670 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 MLLT10P55197 1068 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 PDSS1Q5T2R2 415 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 STXBP5Q5T5C0 1151 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ERMARDQ5T6L9 678 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 NDUFAF5Q5TEU4 345 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 C6orf163Q5TEZ5 329 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 KRT39Q6A163 491 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 SPSB3Q6PJ21 355 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 GFRALQ6UXV0 394 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ASB18Q6ZVZ8 466 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TUBA1AQ71U36 451 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 KRT74Q7RTS7 529 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 SATL1Q86VE3 508 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 EXOC3L1Q86VI1 746 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 CEP57Q86XR8 500 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 MUC20Q8N307 709 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ZBTB8BQ8NAP8 495 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 RBM15BQ8NDT2 890 aaKnown RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 RDM1Q8NG50 284 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 SPATA20Q8TB22 786 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TEKT4Q8WW24 435 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 NXNL1Q96CM4 212 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 MTERF3Q96E29 417 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 LINGO1Q96FE5 620 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 PRMT6Q96LA8 375 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF583Q96ND8 569 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF582Q96NG8 517 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 DUX5Q96PT3 197 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 SERINC2Q96SA4 455 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TUBA1CQ9BQE3 449 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 POLR3CQ9BUI4 534 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 GOLPH3LQ9H4A5 285 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 RABEP2Q9H5N1 569 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 EVA1AQ9H8M9 152 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TBC1D17Q9HA65 648 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF556Q9HAH1 456 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 CCDC177Q9NQR7 707 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 TMEM30AQ9NV96 361 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 MIOSQ9NXC5 875 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 BCCIPQ9P287 314 aaKnown RBP eCLIP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 STK26Q9P289 416 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 KLHL9Q9P2J3 617 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 CFDP1Q9UEE9 299 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.35□□□□□ -2.03
PTPRC-208ENST00000427110 CGNL1Q0VF96 1302 aa2.35□□□□□ -2.03
PTPRC-208ENST00000427110 WDR81Q562E7 1941 aa2.34□□□□□ -2.03
PTPRC-208ENST00000427110 PRAG1Q86YV5 1406 aa2.34□□□□□ -2.03
PTPRC-208ENST00000427110 ZCWPW2A0A1B0GU75 182 aa2.34□□□□□ -2.03
PTPRC-208ENST00000427110 TRBC2A0A5B9 178 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms