RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 SASS6Q6UVJ0 657 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 RAB43Q86YS6 212 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 FAM71BQ8TC56 605 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 VPS35Q96QK1 796 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 RANBP9Q96S59 729 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 TLR10Q9BXR5 811 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 XPO4Q9C0E2 1151 aaKnown RBP14.3□□□□□ -0.12
PDAP1-202ENST00000426447 CBX8Q9HC52 389 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 LATS2Q9NRM7 1088 aa14.3□□□□□ -0.12
PDAP1-202ENST00000426447 CFAP20Q9Y6A4 193 aaKnown RBP14.3□□□□□ -0.12
PDAP1-202ENST00000426447 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 MAP3K7O43318 606 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 HNRNPRO43390 633 aaKnown RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 KLHL41O60662 606 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 LCA5LO95447 670 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 POU3F2P20265 443 aaPredicted RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 CYP2A7P20853 494 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 OTX2P32243 289 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 PRKCIP41743 596 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 ARCN1P48444 511 aaKnown RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 GBE1Q04446 702 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 ADCY2Q08462 1091 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 PRKAA1Q13131 559 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 KRT33BQ14525 404 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 PDK2Q15119 407 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 FBXO38Q6PIJ6 1188 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 TMEM220Q6QAJ8 160 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 APTXQ7Z2E3 356 aaKnown RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 NT5DC3Q86UY8 548 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 CNTD1Q8N815 330 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 CLEC1AQ8NC01 280 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 MARVELD3Q96A59 401 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 HDAC11Q96DB2 347 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 FER1L6-AS2Q96M78 137 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 SRPK1Q96SB4 655 aaKnown RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 ZNF670Q9BS34 389 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 ZCCHC2Q9C0B9 1178 aaKnown RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 THAP2Q9H0W7 228 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 ACTR5Q9H9F9 607 aaPredicted RBP14.29□□□□□ -0.12
PDAP1-202ENST00000426447 SERTAD3Q9UJW9 196 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
PDAP1-202ENST00000426447 TEP1Q99973 2627 aaKnown RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 SLC9B1P1A6NJY1 282 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 OR2AG2A6NM03 316 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 C9J4A7 227 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 PEX12O00623 359 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 MTHFD1P11586 935 aaKnown RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 AGXTP21549 392 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 CDH3P22223 829 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 PBLDP30039 288 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 PREPP48147 710 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 ARSEP51690 589 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 KPNA2P52292 529 aaKnown RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 RIPPLY3P57055 190 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 DMPKQ09013 629 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 AP1B1Q10567 949 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 NFE2L1Q14494 772 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 PTCHD3Q3KNS1 767 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 FAM182AQ5T1J6 154 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 FAM83HQ6ZRV2 1179 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 CARFQ8N187 725 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 ZADH2Q8N4Q0 377 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 RASGEF1AQ8N9B8 481 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 ZFPM2Q8WW38 1151 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 TM9SF4Q92544 642 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 IMP4Q96G21 291 aaKnown RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 TRIB3Q96RU7 358 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 INSM2Q96T92 566 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 CEP41Q9BYV8 373 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 AGPAT4Q9NRZ5 378 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 PCMTD2Q9NV79 361 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 MED13Q9UHV7 2174 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 BTRCQ9Y297 605 aa14.28□□□□□ -0.12
PDAP1-202ENST00000426447 DNMT3AQ9Y6K1 912 aaPredicted RBP14.28□□□□□ -0.12
PDAP1-202ENST00000426447 TMEM150CB9EJG8 249 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 AURKAO14965 403 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 LRRTM2O43300 516 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 LDB2O43679 373 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 UGT1A9O60656 530 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 UGT1A6P19224 532 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 POLR2CP19387 275 aaPredicted RBP14.27□□□□□ -0.13
PDAP1-202ENST00000426447 UGT1A1P22309 533 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 UGT1A4P22310 534 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
PDAP1-202ENST00000426447 RORAP35398 523 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 PER3P56645 1201 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.13
PDAP1-202ENST00000426447 ABRQ12979 859 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 GSE1Q14687 1217 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 NCF4Q15080 339 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 PPP2R5EQ16537 467 aa14.27□□□□□ -0.13
PDAP1-202ENST00000426447 LDLRAP1Q5SW96 308 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms