RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ADRA1DP25100 572 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 PSMA3P25788 255 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 MGAT1P26572 445 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 PRLHRP49683 370 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 MAPK10P53779 464 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 GFERP55789 205 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 CACNG1Q06432 222 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 GPS1Q13098 491 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 SKIDA1Q1XH10 827 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 GPR33Q49SQ1 333 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 CCDC137Q6PK04 289 aaKnown RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 TMEM26Q6ZUK4 368 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 LSMEM2Q8N112 164 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 PPHLN1Q8NEY8 458 aaKnown RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 OR2L2Q8NH16 312 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 RSC1A1Q92681 617 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 HDAC10Q969S8 669 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 CHRAC1Q9NRG0 131 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 THSD1Q9NS62 852 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 HOMER3Q9NSC5 361 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 POT1Q9NUX5 634 aa13.35□□□□□ -0.27
SNX3-204ENST00000426155 IMP3Q9NV31 184 aaKnown RBP13.35□□□□□ -0.27
SNX3-204ENST00000426155 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 TMX2-CTNND1H3BSU7 103 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 ZW10O43264 779 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 OR1I1O60431 355 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 PHF2O75151 1096 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 AVILO75366 819 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 POLBP06746 335 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 ITGA2BP08514 1039 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 RALBP11234 206 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 TPSB2P20231 275 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 HALP42357 657 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 EPHA4P54764 986 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 ACVR1Q04771 509 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 KCNJ11Q14654 390 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 TPSAB1Q15661 275 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 RPE65Q16518 533 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 CYP1B1Q16678 543 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 METRNLQ641Q3 311 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 LDB1Q86U70 411 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 CFAP206Q8IYR0 622 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 C17orf53Q8N3J3 647 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 ACTRT1Q8TDG2 376 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 SH3KBP1Q96B97 665 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 ZNF514Q96K75 400 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 CAPZA3Q96KX2 299 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 LINC00615Q96LM1 132 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 INSM2Q96T92 566 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 CMKLR1Q99788 373 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 TRIM56Q9BRZ2 755 aaKnown RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 SYBUQ9NX95 663 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 FOXJ2Q9P0K8 574 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 NEU2Q9Y3R4 380 aa13.34□□□□□ -0.27
SNX3-204ENST00000426155 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
SNX3-204ENST00000426155 PTPRQQ9UMZ3 2332 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 C9orf172C9J069 976 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 PRAMEF10O60809 474 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 MTHFD1P11586 935 aaKnown RBP13.33□□□□□ -0.28
SNX3-204ENST00000426155 NMBRP28336 390 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 SLC5A2P31639 672 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 ABCG1P45844 678 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 PREPP48147 710 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 LEPRP48357 1165 aaKnown RBP13.33□□□□□ -0.28
SNX3-204ENST00000426155 GNG11P61952 73 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 PPP1CAP62136 330 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 ZNF658BQ4V348 819 aaPredicted RBP13.33□□□□□ -0.28
SNX3-204ENST00000426155 TMEM71Q6P5X7 295 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 C4orf22Q6V702 233 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 CLEC14AQ86T13 490 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 SPACA3Q8IXA5 215 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 MPP5Q8N3R9 675 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 ZNF248Q8NDW4 579 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 OR6P1Q8NGX9 317 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 HM13Q8TCT9 377 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 CPT1BQ92523 772 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 USP7Q93009 1102 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 C12orf66Q96MD2 445 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 NRTNQ99748 197 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 COG4Q9H9E3 785 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 OCIAD1Q9NX40 245 aa13.33□□□□□ -0.28
SNX3-204ENST00000426155 MARCH4Q9P2E8 410 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms