RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 LIMK2P53671 638 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 TMEM115Q12893 351 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 KLF1Q13351 362 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
SGCE-203ENST00000425444 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 PTPRCAPQ14761 206 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 C16orf72Q14CZ0 275 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 TAF1AQ15573 450 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 LDLRAP1Q5SW96 308 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 FAM71DQ8N9W8 422 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 OR4D9Q8NGE8 314 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A7Q9HAW7 530 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A10Q9HAW8 530 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 UGT1A8Q9HAW9 530 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 CPNE7Q9UBL6 633 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 SLC23A2Q9UGH3 650 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
SGCE-203ENST00000425444 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
SGCE-203ENST00000425444 TCRBV7S2A1N4TA0A589 114 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
SGCE-203ENST00000425444 HGSO14964 777 aaPredicted RBP12.49□□□□□ -0.41
SGCE-203ENST00000425444 NRDCO43847 1150 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 VIPP01282 170 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 IDSP22304 550 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 RPL10P27635 214 aaKnown RBP12.49□□□□□ -0.41
SGCE-203ENST00000425444 CSTF2P33240 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
SGCE-203ENST00000425444 ADRA1AP35348 466 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 GDF10P55107 478 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 TMPRSS15P98073 1019 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 PDE1BQ01064 536 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 PARP6Q2NL67 630 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 P3H1Q32P28 736 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 SNAP47Q5SQN1 464 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 GPRC6AQ5T6X5 926 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 CAPRIN2Q6IMN6 1127 aaKnown RBP12.49□□□□□ -0.41
SGCE-203ENST00000425444 TMEM71Q6P5X7 295 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 DDHD1Q8NEL9 900 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 NCSTNQ92542 709 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 NKD1Q969G9 470 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
SGCE-203ENST00000425444 ASB8Q9H765 288 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 TMEM9Q9P0T7 183 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
SGCE-203ENST00000425444 OR2AG2A6NM03 316 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 SEMA7AO75326 666 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 CCDC175P0C221 793 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 PRKAR1AP10644 381 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 THRAP10827 490 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 MSH3P20585 1137 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 PBLDP30039 288 aaPredicted RBP12.48□□□□□ -0.41
SGCE-203ENST00000425444 HALP42357 657 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 EPHA4P54764 986 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 DRG2P55039 364 aaKnown RBP12.48□□□□□ -0.41
SGCE-203ENST00000425444 UBE2IP63279 158 aaKnown RBP12.48□□□□□ -0.41
SGCE-203ENST00000425444 SEPT6Q14141 434 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 LONRF2Q1L5Z9 754 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 FAM129CQ86XR2 697 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
SGCE-203ENST00000425444 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 SLC35B2Q8TB61 432 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 ZNF398Q8TD17 642 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 CXorf40BQ96DE9 158 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 LRRC40Q9H9A6 602 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 LZTFL1Q9NQ48 299 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 POT1Q9NUX5 634 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 SMOXQ9NWM0 555 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 KLHL3Q9UH77 587 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 FEZ2Q9UHY8 353 aaPredicted RBP12.48□□□□□ -0.41
SGCE-203ENST00000425444 NIPBLQ6KC79 2804 aaeCLIP12.48□□□□□ -0.41
SGCE-203ENST00000425444 PCNX1Q96RV3 2341 aa12.48□□□□□ -0.41
SGCE-203ENST00000425444 CSMD2Q7Z408 3487 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 LILRA5A6NI73 299 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 A8MU76 341 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 GAPDHSO14556 408 aaPredicted RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 NKX2-8O15522 239 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
SGCE-203ENST00000425444 METTL18O95568 372 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 IFNB1P01574 187 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 CCL4P13236 92 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 ITGALP20701 1170 aa12.47□□□□□ -0.41
SGCE-203ENST00000425444 HADHAP40939 763 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms