RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 PAK5Q9P286 719 aa17.47■□□□□ 0.39
SBDSP1-202ENST00000423945 SLC2A6Q9UGQ3 507 aa17.47■□□□□ 0.39
SBDSP1-202ENST00000423945 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
SBDSP1-202ENST00000423945 FASNP49327 2511 aaKnown RBP17.47■□□□□ 0.39
SBDSP1-202ENST00000423945 SMG1Q96Q15 3661 aaKnown RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 ATMQ13315 3056 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 EFSO43281 561 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 NRDCO43847 1150 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 UBXN7O94888 489 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 ATP1B2P14415 290 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 FOXN2P32314 431 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 CSTF2P33240 577 aaKnown RBP eCLIP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 PPM1FP49593 454 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 CXADRP78310 365 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 DBN1Q16643 649 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 SOWAHCQ53LP3 525 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 DUS1LQ6P1R4 473 aaKnown RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 DTX1Q86Y01 620 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 RASGEF1CQ8N431 466 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 CCDC89Q8N998 374 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 SPDYE1Q8NFV5 336 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 ART4Q93070 314 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 RMDN2Q96LZ7 410 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 RANBP9Q96S59 729 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 B3GNT4Q9C0J1 378 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 ZMYND15Q9H091 742 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 WWP1Q9H0M0 922 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 AKAP7Q9P0M2 348 aaPredicted RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 FAM8A1Q9UBU6 413 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 KLHL3Q9UH77 587 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 PCDHGA3Q9Y5H0 932 aa17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 CFAP20Q9Y6A4 193 aaKnown RBP17.46■□□□□ 0.39
SBDSP1-202ENST00000423945 CCDC162PA2VCL2 907 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 EFCAB7A8K855 629 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 APRTP07741 180 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 MTHFD1P11586 935 aaKnown RBP17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 HALP42357 657 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 LEPRP48357 1165 aaKnown RBP17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 ACVR1Q04771 509 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 CACNG1Q06432 222 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 COL9A2Q14055 689 aaPredicted RBP17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 RBM12BQ8IXT5 1001 aaKnown RBP17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 CLDN19Q8N6F1 224 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 MAIP1Q8WWC4 291 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 DCUN1D1Q96GG9 259 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 C9orf72Q96LT7 481 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 TAAR9Q96RI9 348 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 B3GALT1Q9Y5Z6 326 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 PRSS21Q9Y6M0 314 aa17.45■□□□□ 0.38
SBDSP1-202ENST00000423945 B4E171 279 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 E7EVH7 732 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 KIF1CO43896 1103 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 ANKRD34CP0C6C1 535 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 LIPCP11150 499 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 TSPAN7P41732 249 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 CAPZBP47756 277 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 LMAN1P49257 510 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 TMPRSS3P57727 454 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 PPP1CAP62136 330 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 TSTD2Q5T7W7 516 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 BROXQ5VW32 411 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 CAPRIN2Q6IMN6 1127 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 TTC27Q6P3X3 843 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 ZNF534Q76KX8 674 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 TAS2R42Q7RTR8 314 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 GPR155Q7Z3F1 870 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 PLXDC1Q8IUK5 500 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 HM13Q8TCT9 377 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 HEXDCQ8WVB3 486 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 SNRNP27Q8WVK2 155 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 MS4A14Q96JA4 679 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 EIF2B3Q9NR50 452 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 IMP3Q9NV31 184 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 SIDT1Q9NXL6 827 aaKnown RBP17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 SLC39A1Q9NY26 324 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 SMARCAL1Q9NZC9 954 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
SBDSP1-202ENST00000423945 C17orf113A0A1B0GUU1 675 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 HEATR9A2RTY3 570 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 CFAP99D6REC4 459 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 CAPN5O15484 640 aaPredicted RBP17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 POLBP06746 335 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 RALBP11234 206 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 AMD1P17707 334 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 ADRA1DP25100 572 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 UCNP55089 124 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 MC2RQ01718 297 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 ARHGAP40Q5TG30 622 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 ANKS6Q68DC2 871 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 PCSK4Q6UW60 755 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 FAM129CQ86XR2 697 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 CFAP206Q8IYR0 622 aa17.43■□□□□ 0.38
SBDSP1-202ENST00000423945 SLC35F6Q8N357 371 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms