RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ZNF500O60304 480 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 SNX2O60749 519 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 S1PR4O95977 384 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CTAGE8P0CG41 777 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 RPL10P27635 214 aaKnown RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 ELK3P41970 407 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CAV1Q03135 178 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CALCOCO2Q13137 446 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 RPA4Q13156 261 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 FRG1Q14331 258 aaKnown RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CRYMQ14894 314 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 TRADDQ15628 312 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 LONRF1Q17RB8 773 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 SPANXN3Q5MJ09 141 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 STEAP4Q687X5 459 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 SPRED1Q7Z699 444 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 SDCCAG8Q86SQ7 713 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CTAGE6Q86UF2 777 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 LRRC6Q86X45 466 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CTAGE4Q8IX94 777 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 GALNT15Q8N3T1 639 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 LILRA3Q8N6C8 439 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 DCBLD1Q8N8Z6 715 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 AVL9Q8NBF6 648 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CARD6Q9BX69 1037 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 DPH5Q9H2P9 285 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 CPNE7Q9UBL6 633 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 KNTC1P50748 2209 aa18.1■□□□□ 0.49
HDAC6-205ENST00000423941 A0A1W2PQM1 296 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 GOLGA8KD6RF30 607 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 GOLGA8TH3BQL2 631 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 CASC3O15234 703 aaKnown RBP18.09■□□□□ 0.49
HDAC6-205ENST00000423941 EIF3HO15372 352 aaKnown RBP eCLIP18.09■□□□□ 0.49
HDAC6-205ENST00000423941 OR56A5P0C7T3 313 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 SLC7A5Q01650 507 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 FOXC1Q12948 553 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 GLE1Q53GS7 698 aaKnown RBP18.09■□□□□ 0.49
HDAC6-205ENST00000423941 C8orf74Q6P047 294 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 SLC9B2Q86UD5 537 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 LPGAT1Q92604 370 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 BIRC8Q96P09 236 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 OR52A5Q9H2C5 316 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 COG4Q9H9E3 785 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 VPS37BQ9H9H4 285 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 INTS10Q9NVR2 710 aaKnown RBP18.09■□□□□ 0.49
HDAC6-205ENST00000423941 DMGDHQ9UI17 866 aaKnown RBP18.09■□□□□ 0.49
HDAC6-205ENST00000423941 NEUROG3Q9Y4Z2 214 aa18.09■□□□□ 0.49
HDAC6-205ENST00000423941 TRBV23OR9-2A0A075B6M9 112 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 SLC5A10A0PJK1 596 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 NDUFS3O75489 264 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 TCEA3O75764 348 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 FTH1P02794 183 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 CCL7P80098 99 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 HHEXQ03014 270 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 RNF187Q5TA31 235 aaPredicted RBP18.08■□□□□ 0.48
HDAC6-205ENST00000423941 UNC5AQ6ZN44 842 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 CNTN4Q8IWV2 1026 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 CFAP206Q8IYR0 622 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 UNC5BQ8IZJ1 945 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 CEP112Q8N8E3 955 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 FBXO25Q8TCJ0 367 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 CALML6Q8TD86 181 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 SH3KBP1Q96B97 665 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 SCNM1Q9BWG6 230 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 LRRN3Q9H3W5 708 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 SLC40A1Q9NP59 571 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 LATS2Q9NRM7 1088 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 ZDHHC18Q9NUE0 388 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 POT1Q9NUX5 634 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 IL1RAPL1Q9NZN1 696 aa18.08■□□□□ 0.48
HDAC6-205ENST00000423941 ZC3H7BQ9UGR2 993 aaKnown RBP18.08■□□□□ 0.48
HDAC6-205ENST00000423941 RHPN2P1A8MT19 583 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 PDZK1P1A8MUH7 402 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 F8W8V4 182 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 LIN7AO14910 233 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CD1CP29017 333 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 PBLDP30039 288 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CD151P48509 253 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 PDIA2Q13087 525 aaKnown RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CAMK2BQ13554 666 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 FASTKD3Q14CZ7 662 aaKnown RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 RPE65Q16518 533 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CLPPQ16740 277 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CCDC157Q569K6 752 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 ZNF789Q5FWF6 425 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 HES3Q5TGS1 186 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CCNI2Q6ZMN8 369 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 ZFPM2Q8WW38 1151 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 INSM2Q96T92 566 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 FOXP3Q9BZS1 431 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 EPB41L5Q9HCM4 733 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 C20orf96Q9NUD7 363 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-205ENST00000423941 MOCS1Q9NZB8 636 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 KLK13Q9UKR3 277 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 FBXO5Q9UKT4 447 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
HDAC6-205ENST00000423941 CDYLQ9Y232 598 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms