RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 EPOP01588 193 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 HMOX2P30519 316 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 ABRQ12979 859 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TBCELQ5QJ74 424 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 CHSY3Q70JA7 882 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 SETD3Q86TU7 594 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PDZD8Q8NEN9 1154 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PNPT1Q8TCS8 783 aaKnown RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 SLC25A23Q9BV35 468 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 DERL2Q9GZP9 239 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TFB2MQ9H5Q4 396 aaKnown RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 CNOT6Q9ULM6 557 aaKnown RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 OR51B4Q9Y5P0 310 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 LOC730098B7Z3J9 87 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 GBAP04062 536 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 ETV3P41162 512 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PREPP48147 710 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PLCL1Q15111 1095 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 SLC14A2Q15849 920 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 C6orf136Q5SQH8 315 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 RARS2Q5T160 578 aaKnown RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PHYKPLQ8IUZ5 450 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 CCDC117Q8IWD4 279 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 HS3ST5Q8IZT8 346 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 HJURPQ8NCD3 748 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 LRRC58Q96CX6 371 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 PPP1R2P1Q96PQ5 205 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 C2orf49Q9BVC5 232 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-204ENST00000423636 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
PTPRN-204ENST00000423636 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 OR7A17O14581 309 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 TAPBPO15533 448 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 SRCP12931 536 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 OGNP20774 298 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 NFKBIAP25963 317 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 VIPR2P41587 438 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 KCNK10P57789 538 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 OR4D2P58180 307 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 PYCR3Q53H96 274 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 LY6G5CQ5SRR4 150 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 SBSNQ6UWP8 590 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 PBXIP1Q96AQ6 731 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 TMIGD2Q96BF3 282 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 DDX18Q9NVP1 670 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 OAS3Q9Y6K5 1087 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 U3KQV3 271 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 FXYD1O00168 92 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 GLUD1P00367 558 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 EPCAMP16422 314 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 SLC6A2P23975 617 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 HMGCLP35914 325 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 CCSMST1Q4G0I0 132 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 ATP6AP1LQ52LC2 224 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 LCA5Q86VQ0 697 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 KIAA2013Q8IYS2 634 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 FBXO30Q8TB52 745 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 CYGBQ8WWM9 190 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 VPS50Q96JG6 964 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 CENPKQ9BS16 269 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 PAK6Q9NQU5 681 aaPredicted RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 ARL15Q9NXU5 204 aa11.74□□□□□ -0.53
PTPRN-204ENST00000423636 PRPF19Q9UMS4 504 aaKnown RBP11.74□□□□□ -0.53
PTPRN-204ENST00000423636 SEC22BO75396 215 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TRBC1P01850 177 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 PRDX6P30041 224 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM215Q68D42 235 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 FAM86B1Q8N7N1 296 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 GPR150Q8NGU9 434 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 FIG4Q92562 907 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 JADE3Q92613 823 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ULK4Q96C45 1275 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 RNF145Q96MT1 663 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM79Q9BSE2 394 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms