RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TERB1Q8NA31 727 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 FIBINQ8TAL6 211 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 MYLIPQ8WY64 445 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 PYCR2Q96C36 320 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 MRPL38Q96DV4 380 aaKnown RBP9.61□□□□□ -0.87
CMSS1-201ENST00000421999 NRBF2Q96F24 287 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 NELL2Q99435 816 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 EXO5Q9H790 373 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 IPPKQ9H8X2 491 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 HEBP1Q9NRV9 189 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 NOP53Q9NZM5 478 aaKnown RBP9.61□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF180Q9UJW8 692 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 TIMM22Q9Y584 194 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 STON1Q9Y6Q2 735 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 PLXNA1Q9UIW2 1896 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 NUMA1Q14980 2115 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 CACNA1GO43497 2377 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 PARP14Q460N5 1801 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 PIPSLA2A3N6 862 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 H3BNC9 293 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 OR1F1O43749 312 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 VPS4BO75351 444 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
CMSS1-201ENST00000421999 SOX9P48436 509 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 SLC7A9P82251 487 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 CHIT1Q13231 466 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 FAAH2Q6GMR7 532 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF783Q6ZMS7 281 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 CLYBLQ8N0X4 340 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 GALNT4Q8N4A0 578 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 STARD8Q92502 1023 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 FIG4Q92562 907 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 VPS50Q96JG6 964 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 GSDMCQ9BYG8 508 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 ARMC7Q9H6L4 198 aa9.61□□□□□ -0.87
CMSS1-201ENST00000421999 A8MU76 341 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 HDAC3O15379 428 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ENO2P09104 434 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 SLC35G6P0C7Q6 338 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 EPHA3P29320 983 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ECHS1P30084 290 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 FRG1Q14331 258 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PHF19Q5T6S3 580 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 HTR3DQ70Z44 454 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ZFP28Q8NHY6 868 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 MIPOL1Q8TD10 442 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PLLPQ9Y342 182 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 DRGXA6NNA5 263 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 SMAD6O43541 496 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 SIN3BO75182 1162 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 IPO13O94829 963 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PRAMEF12O95522 483 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PDHA1P08559 390 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ITGAXP20702 1163 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PSMA4P25789 261 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 NDUFA9Q16795 377 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF542PQ5EBM4 170 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TDRPQ86YL5 185 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ATXN2LQ8WWM7 1075 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 METTL21AQ8WXB1 218 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF358Q9NW07 568 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CROTQ9UKG9 612 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PSAT1Q9Y617 370 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 HNRNPCL2B2RXH8 293 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PI15O43692 258 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 EPOP01588 193 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 AHSGP02765 367 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 NFATC2Q13469 925 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 MAPKAPK3Q16644 382 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PDK4Q16654 411 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ATP13A5Q4VNC0 1218 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TMEM164Q5U3C3 297 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ZCCHC8Q6NZY4 707 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 PAQR3Q6TCH7 311 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TCAIMQ8N3R3 496 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 KYQ8NBH2 561 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TFGQ92734 400 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 ADNPQ9H2P0 1102 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TMEM216Q9P0N5 145 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 LGALS13Q9UHV8 139 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TK2O00142 265 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 MID1O15344 667 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 GRID2O43424 1007 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 LYPLA1O75608 230 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 EPN2O95208 641 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 TYRP1P17643 537 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CRATP43155 626 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CTSOP43234 321 aaPredicted RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 INPP1P49441 399 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CLCN4P51793 760 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 GPNMBQ14956 572 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CST6Q15828 149 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 GPRC6AQ5T6X5 926 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 SRFBP1Q8NEF9 429 aaKnown RBP9.6□□□□□ -0.87
CMSS1-201ENST00000421999 CLHC1Q8NHS4 586 aa9.6□□□□□ -0.87
CMSS1-201ENST00000421999 OLIG1Q8TAK6 271 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms