RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 TUBE1Q9UJT0 475 aa2.83□□□□□ -1.96
PTPRC-207ENST00000418674 B3GALT5Q9Y2C3 310 aa2.83□□□□□ -1.96
PTPRC-207ENST00000418674 KLHL20Q9Y2M5 609 aa2.83□□□□□ -1.96
PTPRC-207ENST00000418674 LOXL2Q9Y4K0 774 aa2.83□□□□□ -1.96
PTPRC-207ENST00000418674 TCF20Q9UGU0 1960 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 IGLV5-52A0A0A0MRZ9 124 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 CLEC18AA5D8T8 446 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 IFITM10A6NMD0 228 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 H0YIN7 160 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 TMEM189-UBE2V1I3L0A0 370 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 PRAMEF11O60813 436 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 TADA2AO75478 443 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 RFPL2O75678 378 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 TOMM70O94826 608 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SLCO2B1O94956 709 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 TRUB2O95900 331 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 CCDC175P0C221 793 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FCGR1AP12314 374 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 GJA1P17302 382 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 KCNA5P22460 613 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 HOXC13P31276 330 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 MC5RP33032 325 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 CDH13P55290 713 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 BRWD1-AS2P59051 145 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SEC61A1P61619 476 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 UBE2V1Q13404 147 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 DHX34Q14147 1143 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 MELKQ14680 651 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SETMARQ53H47 684 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 RAB6CQ53S08 254 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 ZDHHC20Q5W0Z9 365 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FAM109BQ6ICB4 259 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 RGMBQ6NW40 437 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 MFSD6Q6ZSS7 791 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FJX1Q86VR8 437 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 IQCHQ86VS3 1027 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 PM20D2Q8IYS1 436 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 ZNF34Q8IZ26 560 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FBXO39Q8N4B4 442 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 AFAP1Q8N556 730 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 PI4KAP1Q8N8J0 262 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 CLEC18CQ8NCF0 446 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 MSANTD4Q8NCY6 345 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 LMO3Q8TAP4 145 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 TBC1D16Q8TBP0 767 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 WDR20Q8TBZ3 569 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 UTP15Q8TED0 518 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FAM216AQ8WUB2 273 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SLC44A1Q8WWI5 657 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 DNAAF4Q8WXU2 420 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 ERLEC1Q96DZ1 483 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SPACA9Q96E40 222 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FER1L6-AS2Q96M78 137 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 JAKMIP1Q96N16 626 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SMC6Q96SB8 1091 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 PCYT2Q99447 389 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 MTERF1Q99551 399 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 NAA11Q9BSU3 229 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 DESI2Q9BSY9 194 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SLC25A23Q9BV35 468 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 RAB6CQ9H0N0 254 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 OPA3Q9H6K4 179 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 ANKZF1Q9H8Y5 726 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 DBNDD1Q9H9R9 158 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 ABCF3Q9NUQ8 709 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 RCC2Q9P258 522 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 IL17BQ9UHF5 180 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 DDX25Q9UHL0 483 aaKnown RBP2.82□□□□□ -1.96
PTPRC-207ENST00000418674 SNX9Q9Y5X1 595 aa2.82□□□□□ -1.96
PTPRC-207ENST00000418674 EDDM13A0A1B0GTR0 161 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 A0A1W2PPM1 405 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 DENND3A2RUS2 1198 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 LINC01553A4QN01 128 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 SLC16A5O15375 505 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 ZBTB43O43298 467 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 KCNJ13O60928 360 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 RECQL5O94762 991 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-207ENST00000418674 CLDN14O95500 239 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 BAG2O95816 211 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 LINGO3P0C6S8 592 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 PFKFB1P16118 471 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 IFNAR1P17181 557 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 S1PR1P21453 382 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 DNASE1P24855 282 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 PTAFRP25105 342 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 ITGB8P26012 769 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 CORO1AP31146 461 aaKnown RBP2.81□□□□□ -1.96
PTPRC-207ENST00000418674 MATR3P43243 847 aaKnown RBP eCLIP2.81□□□□□ -1.96
PTPRC-207ENST00000418674 CLK1P49759 484 aaKnown RBP2.81□□□□□ -1.96
PTPRC-207ENST00000418674 CTSCP53634 463 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 SNRPEP62304 92 aaKnown RBP2.81□□□□□ -1.96
PTPRC-207ENST00000418674 PDE1BQ01064 536 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 PPARDQ03181 441 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 DDR1Q08345 913 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 RALGDSQ12967 914 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 GAGE2BQ13066 116 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 CAMK2DQ13557 499 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 GAGE2EQ4V326 116 aa2.81□□□□□ -1.96
PTPRC-207ENST00000418674 XKR9Q5GH70 373 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms