RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 KCNAB3O43448 404 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HCRTO43612 131 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRAPPC3O43617 180 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PRPSAP2O60256 369 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCNT2O60583 730 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 NBNO60934 754 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSF2BPO75031 334 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TADA2AO75478 443 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HEXIM1O94992 359 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PLAUP00749 431 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CRYABP02511 175 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT7P08729 469 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CLTBP09497 229 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSPA1AP0DMV8 641 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSPA1BP0DMV9 641 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PSG1P11464 419 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HOXB6P17509 224 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TYMPP19971 482 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 LMO2P25791 158 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TKTP29401 623 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 RFC2P35250 354 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GPD2P43304 727 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GABRB2P47870 512 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 AARSP49588 968 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SULT1E1P49888 294 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CDK7P50613 346 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DGKQP52824 942 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 LBX1P52954 281 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAP3K7CLP57077 242 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 LINC00205P59089 165 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TAS2R40P59535 323 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 RPL7AP62424 266 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TLE2Q04725 743 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ADIGQ0VDE8 80 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ELAVL2Q12926 359 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GPS2Q13227 327 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MTA1Q13330 715 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DHX34Q14147 1143 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GALEQ14376 348 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HLTFQ14527 1009 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 KRT81Q14533 505 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAPRE1Q15691 268 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CDO1Q16878 200 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GLE1Q53GS7 698 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CLLU1OSQ5K130 101 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DAB2IPQ5VWQ8 1189 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF280DQ6N043 979 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DCLRE1AQ6PJP8 1040 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CRTC1Q6UUV9 634 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC39A5Q6ZMH5 540 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF517Q6ZMY9 492 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 C4orf50Q6ZRC1 276 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 COLCA1Q6ZS62 124 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ANKRD33Q7Z3H0 272 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIM3Q86V86 326 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTC30AQ86WT1 665 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC13A5Q86YT5 568 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SPATA2LQ8IUW3 424 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 KATNAL2Q8IYT4 538 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SAMD14Q8IZD0 417 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DCP1BQ8IZD4 617 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CRYBG2Q8N1P7 616 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MMGT1Q8N4V1 131 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARFGAP1Q8N6T3 406 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 EMC1Q8N766 993 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ANKRD52Q8NB46 1076 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC26Q8TAB7 109 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 JOSD2Q8TAC2 188 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 GRK7Q8WTQ7 553 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 RSPH1Q8WYR4 309 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIGKQ92643 395 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MYLPFQ96A32 169 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM149B1Q96BN6 582 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 MCRS1Q96EZ8 462 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRMT61AQ96FX7 289 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF333Q96JL9 665 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HSFY1Q96LI6 401 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CCDC114Q96M63 670 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 HNRNPABQ99729 332 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 NCAPGQ9BPX3 1015 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PAAF1Q9BRP4 392 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM175Q9BSA9 504 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRMOQ9BU70 441 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 COLEC11Q9BWP8 271 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 AP1M1Q9BXS5 423 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 PARD6BQ9BYG5 372 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRIM7Q9C029 511 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 DDX47Q9H0S4 455 aaKnown RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZWILCHQ9H900 591 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARFGAP3Q9NP61 516 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TBC1D13Q9NVG8 400 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM45AQ9NWC5 275 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 CYTH4Q9UIA0 394 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTC7AQ9ULT0 858 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 STAP1Q9ULZ2 295 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 NME7Q9Y5B8 376 aa3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 SF3B1O75533 1304 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF638Q14966 1978 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms