RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 HIST1H2AAQ96QV6 131 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 MLST8Q9BVC4 326 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 NACA2Q9H009 215 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 SERHL2Q9H4I8 314 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 ZWILCHQ9H900 591 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 GLOD4Q9HC38 313 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 TRPC7Q9HCX4 862 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 WDR6Q9NNW5 1121 aaKnown RBP5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 PIGVQ9NUD9 493 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 KCTD5Q9NXV2 234 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 COX16Q9P0S2 106 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 PCSK1NQ9UHG2 260 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 PACSIN2Q9UNF0 486 aaPredicted RBP5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 USP22Q9UPT9 525 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 CHD9Q3L8U1 2897 aa5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 PRRC2BQ5JSZ5 2229 aaKnown RBP5.98□□□□□ -1.45
NIFKP3-201ENST00000417799 TRAV19A0A0A6YYK7 116 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KCNU1A8MYU2 1149 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SYT5O00445 386 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 YY2O15391 372 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MSI1O43347 362 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 COCHO43405 550 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 OLFM2O95897 454 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SLC2A3P11169 496 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MBL2P11226 248 aaPredicted RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PRLRP16471 622 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 GJA1P17302 382 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SLC5A2P31639 672 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CCR1P32246 355 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ADRA1BP35368 520 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 GJC1P36383 396 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SERPINF1P36955 418 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MARCKSL1P49006 195 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 DNA2P51530 1060 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 AIF1P55008 147 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 RWDD2BP57060 319 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 NTHL1P78549 312 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 COG7P83436 770 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 NSUN2Q08J23 767 aaKnown RBP eCLIP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 GPS1Q13098 491 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 TEAD2Q15562 447 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KCNT1Q5JUK3 1230 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 BRMS1LQ5PSV4 323 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ERMARDQ5T6L9 678 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 FNDC7Q5VTL7 733 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PAPD7Q5XG87 772 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SLC9A4Q6AI14 798 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 TXNRD3NBQ6F5E7 133 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 Q7L0L9 218 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 FAM131BQ86XD5 332 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PSTKQ8IV42 348 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KATNAL2Q8IYT4 538 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 RCOR2Q8IZ40 523 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CCDC185Q8N715 623 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ARL14EPQ8N8R7 260 aaPredicted RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MAB21L3Q8N8X9 362 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MYRIPQ8NFW9 859 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KIF18AQ8NI77 898 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 STYXQ8WUJ0 223 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 TEKT4Q8WW24 435 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 KRT35Q92764 455 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 NTAN1Q96AB6 310 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 FKBP10Q96AY3 582 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PABPC5Q96DU9 382 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SLC22A12Q96S37 553 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PEBP4Q96S96 227 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CYP2S1Q96SQ9 504 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CDX2Q99626 313 aaPredicted RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 PRPF18Q99633 342 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 AIFM2Q9BRQ8 373 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 MYLK2Q9H1R3 596 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 S1PR5Q9H228 398 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 TASP1Q9H6P5 420 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ARHGEF38Q9NXL2 777 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 VPS51Q9UID3 782 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 RASAL2Q9UJF2 1139 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CA14Q9ULX7 337 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SNX12Q9UMY4 172 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 HBS1LQ9Y450 684 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 SAR1BQ9Y6B6 198 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 COL4A4P53420 1690 aaPredicted RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ATG2AQ2TAZ0 1938 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 GREB1Q4ZG55 1949 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 CLUHO75153 1309 aa5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 ZNF638Q14966 1978 aaKnown RBP5.97□□□□□ -1.45
NIFKP3-201ENST00000417799 LRRD1A4D1F6 860 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 ZAR1LA6NP61 321 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 AGPSO00116 658 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 CES2O00748 559 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 PEX1O43933 1283 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 SNX2O60749 519 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 TBX10O75333 385 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 TNFRSF6BO95407 300 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 IGLV3-27P01718 113 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 APOEP02649 317 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 HMBSP08397 361 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 CEBPBP17676 345 aa5.96□□□□□ -1.46
NIFKP3-201ENST00000417799 TCP1P17987 556 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms