RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TIPARPQ7Z3E1 657 aaKnown RBP24.82■■□□□ 1.56
VEGFA-208ENST00000417285 OR4K2Q8NGD2 314 aa24.82■■□□□ 1.56
VEGFA-208ENST00000417285 ZFPM2Q8WW38 1151 aa24.82■■□□□ 1.56
VEGFA-208ENST00000417285 KLHL6Q8WZ60 621 aa24.82■■□□□ 1.56
VEGFA-208ENST00000417285 FEZ2Q9UHY8 353 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-208ENST00000417285 ACSL5Q9ULC5 683 aa24.82■■□□□ 1.56
VEGFA-208ENST00000417285 PACSIN2Q9UNF0 486 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-208ENST00000417285 ARL5AQ9Y689 179 aa24.82■■□□□ 1.56
VEGFA-208ENST00000417285 MGAT4DA6NG13 374 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 OR2AG2A6NM03 316 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 FTCDO95954 541 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 ITGB6P18564 788 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 AKT1P31749 480 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 LEPRP48357 1165 aaKnown RBP24.81■■□□□ 1.56
VEGFA-208ENST00000417285 MC1RQ01726 317 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 ASB8Q9H765 288 aa24.81■■□□□ 1.56
VEGFA-208ENST00000417285 LOC101059948A0A1B0GTJ6 334 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 SLC28A2O43868 658 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 SRP72O76094 671 aaKnown RBP24.8■■□□□ 1.56
VEGFA-208ENST00000417285 DLGAP3O95886 979 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 SEPHS1P49903 392 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 PTPRCAPQ14761 206 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 FNBP1LQ5T0N5 605 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 IRGCQ6NXR0 463 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 RSC1A1Q92681 617 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 OR6C1Q96RD1 312 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 APOL2Q9BQE5 337 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 ULBP3Q9BZM4 244 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 ARNT2Q9HBZ2 717 aa24.8■■□□□ 1.56
VEGFA-208ENST00000417285 DDX3YO15523 660 aaKnown RBP24.79■■□□□ 1.56
VEGFA-208ENST00000417285 GPR39O43194 453 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 RALBP11234 206 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 CA5AP35218 305 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 CCR10P46092 362 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 NFE2L1Q14494 772 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 CRTC2Q53ET0 693 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-208ENST00000417285 C6orf15Q6UXA7 325 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-208ENST00000417285 FAM83HQ6ZRV2 1179 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-208ENST00000417285 OR2L2Q8NH16 312 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 HEXDCQ8WVB3 486 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 UBXN4Q92575 508 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 ULK4Q96C45 1275 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 DCUN1D1Q96GG9 259 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 TBL1YQ9BQ87 522 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 SLC25A18Q9H1K4 315 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 SEMA5BQ9P283 1151 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 TUBD1Q9UJT1 453 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 PSMD13Q9UNM6 376 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 MYO18BQ8IUG5 2567 aa24.79■■□□□ 1.56
VEGFA-208ENST00000417285 A0A0U1RQJ8 604 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 AGAP14A8MT82 685 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 NKX2-8O15522 239 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 KIF1CO43896 1103 aaKnown RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 NELFEP18615 380 aaKnown RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 HADHAP40939 763 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 STAT5AP42229 794 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 MSLNQ13421 630 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 OLIG2Q13516 323 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 ARHGEF18Q6ZSZ5 1173 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 FAM92BQ6ZTR7 304 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 BPHLQ86WA6 291 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 RNF10Q8N5U6 811 aaKnown RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 LINC00615Q96LM1 132 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-208ENST00000417285 FKBPLQ9UIM3 349 aa24.78■■□□□ 1.56
VEGFA-208ENST00000417285 MTHFD1P11586 935 aaKnown RBP24.77■■□□□ 1.56
VEGFA-208ENST00000417285 FGF5P12034 268 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 SH3BP2P78314 561 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 XIAPP98170 497 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 KLF1Q13351 362 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-208ENST00000417285 PARP6Q2NL67 630 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.77■■□□□ 1.562e-8■■□□□ 12.5
VEGFA-208ENST00000417285 BCL7AQ4VC05 210 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 RASGRP3Q8IV61 690 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 UNC5BQ8IZJ1 945 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 HES6Q96HZ4 224 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 FCRL4Q96PJ5 515 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 TSGA10Q9BZW7 698 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 PDE7BQ9NP56 450 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 KCTD3Q9Y597 815 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 RPS6KL1Q9Y6S9 549 aa24.77■■□□□ 1.56
VEGFA-208ENST00000417285 PLCL1Q15111 1095 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 GPR33Q49SQ1 333 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 DENND5AQ6IQ26 1287 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 DET1Q7L5Y6 550 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 PRICKLE2Q7Z3G6 844 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 PPP1R3BQ86XI6 285 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 KMT5CQ86Y97 462 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 KLHDC8BQ8IXV7 354 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 FAM71DQ8N9W8 422 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 SLC41A2Q96JW4 573 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 INSM2Q96T92 566 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-208ENST00000417285 CD180Q99467 661 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 CCM2Q9BSQ5 444 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 IMP3Q9NV31 184 aaKnown RBP24.76■■□□□ 1.55
VEGFA-208ENST00000417285 CRLS1Q9UJA2 301 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 CAPN6Q9Y6Q1 641 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 COLEC10Q9Y6Z7 277 aa24.76■■□□□ 1.55
VEGFA-208ENST00000417285 GOLGA6L3A6NEY3 463 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 CFAP99D6REC4 459 aa24.75■■□□□ 1.55
VEGFA-208ENST00000417285 MT-ND3P03897 115 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms