RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	KIR2DS5	A0A0G2JLQ3	304 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651		A0A0G2JNG1	304 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	FAM237A	A0A1B0GTK4	181 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KIR2DS3	K7RE56	304 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CPNE3	O75131	537 aa	Known RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CP	P00450	1065 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	VIP	P01282	170 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NEFL	P07196	543 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CD1E	P15812	388 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF8	P17098	575 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	XRCC1	P18887	633 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KLK2	P20151	261 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	IL4R	P24394	825 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	MST1	P26927	711 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NOS3	P29474	1203 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CDH5	P33151	784 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KRT9	P35527	623 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	YBEY	P58557	167 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CDC16	Q13042	620 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KIR2DS5	Q14953	304 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CA9	Q16790	459 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF789	Q5FWF6	425 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF324B	Q6AW86	544 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	DPY19L2P1	Q6NXN4	242 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TTI2	Q6NXR4	508 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CRTC3	Q6UUV7	619 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF765	Q7L2R6	523 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF808	Q8N4W9	903 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NPW	Q8N729	165 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	DNAJB14	Q8TBM8	379 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	FAM172A	Q8WUF8	416 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PIH1D2	Q8WWB5	315 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SEC14L1	Q92503	715 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	WDR77	Q9BQA1	342 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	HERPUD2	Q9BSE4	406 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CINP	Q9BW66	212 aa	Predicted RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NLN	Q9BYT8	704 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	STN1	Q9H668	368 aa	Known RBP	8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CHST11	Q9NPF2	352 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KCND1	Q9NSA2	647 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SEMA5B	Q9P283	1151 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CSPG4	Q6UVK1	2322 aa		8.43	□□□□□ -1.06
NIF3L1-206	ENST00000416651	VPS13C	Q709C8	3753 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651		A0A1W2PQJ5	194 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TMEM200C	A6NKL6	621 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	C2CD4B	A6NLJ0	364 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TOX3	O15405	576 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF202	O95125	648 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CTSB	P07858	339 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	RAB40AL	P0C0E4	278 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZSCAN22	P10073	491 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	RARA	P10276	462 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SSTR4	P31391	388 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SCNN1A	P37088	669 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PBX1	P40424	430 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	IST1	P53990	364 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	OTUD4	Q01804	1114 aa	Known RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	LTB	Q06643	244 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	FOXD4	Q12950	439 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PEX6	Q13608	980 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PARP15	Q460N3	678 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ACBD5	Q5T8D3	534 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZNF658	Q5TYW1	1059 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NAA35	Q5VZE5	725 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	KLHL10	Q6JEL2	608 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PPP1R32	Q7Z5V6	425 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NOP9	Q86U38	636 aa	Known RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TGIF2LY	Q8IUE0	185 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ZDHHC17	Q8IUH5	632 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SYTL1	Q8IYJ3	562 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	OR1L3	Q8NH93	324 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CENPI	Q92674	756 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	MEGF10	Q96KG7	1140 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TLR10	Q9BXR5	811 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	LIME1	Q9H400	295 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	EPB41L1	Q9H4G0	881 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	UCK1	Q9HA47	277 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	MCCC2	Q9HCC0	563 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	SLC40A1	Q9NP59	571 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	DLL4	Q9NR61	685 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	EPHA6	Q9UF33	1036 aa		8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	G3BP2	Q9UN86	482 aa	Known RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	RPH3A	Q9Y2J0	694 aa	Predicted RBP	8.42	□□□□□ -1.06
NIF3L1-206	ENST00000416651	COL6A5	A8TX70	2615 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	ABCA4	P78363	2273 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	DFFA	O00273	331 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PCDH17	O14917	1159 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	GRID2	O43424	1007 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	MTX2	O75431	263 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CLDN7	O95471	211 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	PEX11B	O96011	259 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	JCHAIN	P01591	159 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	MME	P08473	750 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CBSL	P0DN79	551 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CAPN3	P20807	821 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	CBS	P35520	551 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	TSFM	P43897	325 aa	Known RBP	8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	RRAD	P55042	308 aa		8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	POLR2L	P62875	67 aa	Known RBP	8.41	□□□□□ -1.06
NIF3L1-206	ENST00000416651	NOMO3	P69849	1222 aa		8.41	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms