RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TAS2R39P59534 338 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TUBA4AP68366 448 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TXNL4AP83876 142 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 RHDQ02161 417 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 HNRNPA1L2Q32P51 320 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 SPATS1Q496A3 300 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ZNF805Q5CZA5 627 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ZNF789Q5FWF6 425 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 KRT80Q6KB66 452 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PARM1Q6UWI2 310 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CHSY3Q70JA7 882 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ZSWIM9Q86XI8 627 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 RAVER1Q8IY67 606 aaKnown RBP11.43□□□□□ -0.58
RFFL-205ENST00000415395 PELI3Q8N2H9 469 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 TRIML2Q8N7C3 387 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 GOLM1Q8NBJ4 401 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 CHST14Q8NCH0 376 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ACVR1CQ8NER5 493 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 HM13Q8TCT9 377 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SORCS1Q8WY21 1168 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SUSD6Q92537 303 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 EID2BQ96D98 161 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ZNF597Q96LX8 424 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 KLHL32Q96NJ5 620 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 ASB2Q96Q27 587 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 SMIM14Q96QK8 99 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 KXD1Q9BQD3 176 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 GRIP2Q9C0E4 1043 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 MEAF6Q9HAF1 191 aa11.43□□□□□ -0.58
RFFL-205ENST00000415395 NPIPB15A6NHN6 443 aaPredicted RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 PSMD12O00232 456 aaPredicted RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 ARNTLO00327 626 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 SDHDO14521 159 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 VILLO15195 856 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 NDUFS3O75489 264 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 LEFTY1O75610 366 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 SLC4A1P02730 911 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 SNRPB2P08579 225 aaKnown RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 ZNF23P17027 643 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 ITGALP20701 1170 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 FDXRP22570 491 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 GDI1P31150 447 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 SPAM1P38567 509 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 PTGER3P43115 390 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 GLRBP48167 497 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 ESRRGP62508 458 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 MYBPC1Q00872 1141 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 FASTKQ14296 549 aaKnown RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 SEMA3AQ14563 771 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 GPR33Q49SQ1 333 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 FNDC3BQ53EP0 1204 aaKnown RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 RBM20Q5T481 1227 aaKnown RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 CRTC1Q6UUV9 634 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 SNX20Q7Z614 316 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 CEP97Q8IW35 865 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 CENPLQ8N0S6 344 aaPredicted RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 LSMEM2Q8N112 164 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 GALNT4Q8N4A0 578 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TMEM151AQ8N4L1 468 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TMEM102Q8N9M5 508 aaPredicted RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TNIP2Q8NFZ5 429 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TSPAN14Q8NG11 270 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 LPGAT1Q92604 370 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 FGF14Q92915 247 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 NXPE3Q969Y0 559 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 ROPN1LQ96C74 230 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 PLEKHG4BQ96PX9 1271 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 CCT7Q99832 543 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 AARSD1Q9BTE6 412 aaKnown RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TTYH1Q9H313 450 aaPredicted RBP11.42□□□□□ -0.58
RFFL-205ENST00000415395 TMEM245Q9H330 911 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 BRD9Q9H8M2 597 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 RAD18Q9NS91 495 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 UBAP1Q9NZ09 502 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 CD207Q9UJ71 328 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 CROTQ9UKG9 612 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 MYRFQ9Y2G1 1151 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 AK5Q9Y6K8 562 aa11.42□□□□□ -0.58
RFFL-205ENST00000415395 TRBV5-4A0A0C4DH59 114 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 TBC1D3BA6NDS4 549 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 UPK3BL1B0FP48 263 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 UPK3BL2E5RIL1 263 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 WISP3O95389 354 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 CLDN7O95471 211 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 APODP05090 189 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 F7P08709 466 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 SBK3P0C264 359 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 ATP6V1B1P15313 513 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 VIPR1P32241 457 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 ACADVLP49748 655 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 INHBCP55103 352 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 MS4A2Q01362 244 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms