RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SYT2Q8N9I0 419 aaPredicted RBP2.56□□□□□ -2
MCF2-204ENST00000414978 OR52E1Q8NGJ3 308 aa2.56□□□□□ -2
MCF2-204ENST00000414978 FBXO30Q8TB52 745 aa2.56□□□□□ -2
MCF2-204ENST00000414978 FAM151AQ8WW52 585 aa2.56□□□□□ -2
MCF2-204ENST00000414978 SHC3Q92529 594 aa2.56□□□□□ -2
MCF2-204ENST00000414978 WBP2Q969T9 261 aa2.56□□□□□ -2
MCF2-204ENST00000414978 ORAI1Q96D31 301 aa2.56□□□□□ -2
MCF2-204ENST00000414978 MGME1Q9BQP7 344 aa2.56□□□□□ -2
MCF2-204ENST00000414978 MLPHQ9BV36 600 aaPredicted RBP2.56□□□□□ -2
MCF2-204ENST00000414978 NTMT1Q9BV86 223 aa2.56□□□□□ -2
MCF2-204ENST00000414978 EGLN1Q9GZT9 426 aa2.56□□□□□ -2
MCF2-204ENST00000414978 PLEKHA4Q9H4M7 779 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CRLF2Q9HC73 371 aa2.56□□□□□ -2
MCF2-204ENST00000414978 WDR6Q9NNW5 1121 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 CD209Q9NNX6 404 aa2.56□□□□□ -2
MCF2-204ENST00000414978 MBNL1Q9NR56 388 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 ZBTB40Q9NUA8 1239 aa2.56□□□□□ -2
MCF2-204ENST00000414978 TMEM184CQ9NVA4 438 aa2.56□□□□□ -2
MCF2-204ENST00000414978 TMEM248Q9NWD8 314 aa2.56□□□□□ -2
MCF2-204ENST00000414978 SOHLH2Q9NX45 425 aa2.56□□□□□ -2
MCF2-204ENST00000414978 ADPRHL2Q9NX46 363 aa2.56□□□□□ -2
MCF2-204ENST00000414978 TRMT112Q9UI30 125 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 A4GNTQ9UNA3 340 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CMAHPQ9Y471 501 aa2.56□□□□□ -2
MCF2-204ENST00000414978 N6AMT1Q9Y5N5 214 aa2.56□□□□□ -2
MCF2-204ENST00000414978 SALL1Q9NSC2 1324 aa2.56□□□□□ -2
MCF2-204ENST00000414978 OR6C68A6NDL8 312 aa2.56□□□□□ -2
MCF2-204ENST00000414978 AHRRA9YTQ3 701 aa2.56□□□□□ -2
MCF2-204ENST00000414978 F8W810 466 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CLIC2O15247 247 aa2.56□□□□□ -2
MCF2-204ENST00000414978 FOXS1O43638 330 aa2.56□□□□□ -2
MCF2-204ENST00000414978 PLPP2O43688 288 aa2.56□□□□□ -2
MCF2-204ENST00000414978 TMPRSS11DO60235 418 aa2.56□□□□□ -2
MCF2-204ENST00000414978 PALMO75781 387 aa2.56□□□□□ -2
MCF2-204ENST00000414978 SPDEFO95238 335 aa2.56□□□□□ -2
MCF2-204ENST00000414978 PAHP00439 452 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CD63P08962 238 aa2.56□□□□□ -2
MCF2-204ENST00000414978 C1SP09871 688 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CTPS1P17812 591 aa2.56□□□□□ -2
MCF2-204ENST00000414978 IGFBP2P18065 325 aa2.56□□□□□ -2
MCF2-204ENST00000414978 GPTP24298 496 aa2.56□□□□□ -2
MCF2-204ENST00000414978 PPIFP30405 207 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 RFC2P35250 354 aa2.56□□□□□ -2
MCF2-204ENST00000414978 BMXP51813 675 aa2.56□□□□□ -2
MCF2-204ENST00000414978 SLURP1P55000 103 aa2.56□□□□□ -2
MCF2-204ENST00000414978 HNRNPKP61978 463 aaKnown RBP eCLIP2.56□□□□□ -2
MCF2-204ENST00000414978 RPA4Q13156 261 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CYP2A13Q16696 494 aa2.56□□□□□ -2
MCF2-204ENST00000414978 EIF2S3LQ2VIR3 472 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 TMEM270Q6UE05 265 aa2.56□□□□□ -2
MCF2-204ENST00000414978 KCTD9Q7L273 389 aa2.56□□□□□ -2
MCF2-204ENST00000414978 RTL3Q8N8U3 475 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 IQUBQ8NA54 791 aa2.56□□□□□ -2
MCF2-204ENST00000414978 LPPQ93052 612 aa2.56□□□□□ -2
MCF2-204ENST00000414978 ERGIC1Q969X5 290 aa2.56□□□□□ -2
MCF2-204ENST00000414978 RAB7BQ96AH8 199 aa2.56□□□□□ -2
MCF2-204ENST00000414978 CCDC43Q96MW1 224 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 H2AFJQ9BTM1 129 aa2.56□□□□□ -2
MCF2-204ENST00000414978 UPF3AQ9H1J1 476 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 TCP11L1Q9NUJ3 509 aa2.56□□□□□ -2
MCF2-204ENST00000414978 AATFQ9NY61 560 aaKnown RBP eCLIP2.56□□□□□ -2
MCF2-204ENST00000414978 CISD1Q9NZ45 108 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 NFU1Q9UMS0 254 aa2.56□□□□□ -2
MCF2-204ENST00000414978 DTX4Q9Y2E6 619 aa2.56□□□□□ -2
MCF2-204ENST00000414978 REXO2Q9Y3B8 237 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 PDS5AQ29RF7 1337 aaKnown RBP2.56□□□□□ -2
MCF2-204ENST00000414978 SCN5AQ14524 2016 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GAGE10A6NGK3 116 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZNF263O14978 683 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZBTB14O43829 449 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SLC25A12O75746 678 aa2.55□□□□□ -2
MCF2-204ENST00000414978 CDKL5O76039 1030 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TRUB2O95900 331 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 CYP1A2P05177 515 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ADRA1DP25100 572 aa2.55□□□□□ -2
MCF2-204ENST00000414978 DDX6P26196 483 aaKnown RBP eCLIP2.55□□□□□ -2
MCF2-204ENST00000414978 CNR2P34972 360 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KHKP50053 298 aa2.55□□□□□ -2
MCF2-204ENST00000414978 GP2P55259 537 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 CD81P60033 236 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PRAMEP78395 509 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ACSM2AQ08AH3 577 aa2.55□□□□□ -2
MCF2-204ENST00000414978 TP53BP2Q13625 1128 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ZNF273Q14593 569 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SMU1Q2TAY7 513 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ANXA2RQ3ZCQ2 193 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SYTL3Q4VX76 610 aa2.55□□□□□ -2
MCF2-204ENST00000414978 RNASE12Q5GAN4 147 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 PCID2Q5JVF3 399 aa2.55□□□□□ -2
MCF2-204ENST00000414978 EPHA10Q5JZY3 1008 aa2.55□□□□□ -2
MCF2-204ENST00000414978 SPATA46Q5T0L3 261 aa2.55□□□□□ -2
MCF2-204ENST00000414978 RARS2Q5T160 578 aaKnown RBP2.55□□□□□ -2
MCF2-204ENST00000414978 C10orf76Q5T2E6 689 aa2.55□□□□□ -2
MCF2-204ENST00000414978 ACSM2BQ68CK6 577 aa2.55□□□□□ -2
MCF2-204ENST00000414978 KRT80Q6KB66 452 aa2.55□□□□□ -2
MCF2-204ENST00000414978 DCDC5Q6ZRR9 648 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PTCHD4Q6ZW05 846 aa2.55□□□□□ -2
MCF2-204ENST00000414978 COPS6Q7L5N1 327 aa2.55□□□□□ -2
MCF2-204ENST00000414978 MMP21Q8N119 569 aa2.55□□□□□ -2
MCF2-204ENST00000414978 PARP16Q8N5Y8 322 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms