RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DCTN3O75935 186 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 ITGB6P18564 788 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 AOC1P19801 751 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 FDXRP22570 491 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 RPA3P35244 121 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-202ENST00000414700 CCNFP41002 786 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 NSG1P42857 185 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SFSWAPQ12872 951 aaKnown RBP15.31■□□□□ 0.04
SHMT2-202ENST00000414700 MAP7D1Q3KQU3 841 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 SPDYAQ5MJ70 313 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 FAM45BPQ6NSW5 357 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 NEK5Q6P3R8 708 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 NAPRTQ6XQN6 538 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 HEATR4Q86WZ0 1026 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 FAM45AQ8TCE6 357 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 TTC1Q99614 292 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 GPR21Q99679 349 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 TBC1D10AQ9BXI6 508 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 PITPNM3Q9BZ71 974 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 CCDC68Q9H2F9 335 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 NMRK1Q9NWW6 199 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 HAO1Q9UJM8 370 aa15.31■□□□□ 0.04
SHMT2-202ENST00000414700 LRRC72A6NJI9 287 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 OR2AG2A6NM03 316 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 C10orf142B7Z368 130 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 ESR1P03372 595 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 IGHV4-34P06331 123 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 PYGLP06737 847 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 CD6P30203 668 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 IGFALSP35858 605 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 POLE2P56282 527 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
SHMT2-202ENST00000414700 LRRC23Q53EV4 343 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-202ENST00000414700 LYPLAL1Q5VWZ2 237 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 NLRP8Q86W28 1048 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 CENPLQ8N0S6 344 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-202ENST00000414700 BEND7Q8N7W2 519 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-202ENST00000414700 ANKRD49Q8WVL7 239 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 FAM192AQ9GZU8 254 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 CEP192Q8TEP8 1941 aa15.3■□□□□ 0.04
SHMT2-202ENST00000414700 POM121BA6NF01 834 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 H0Y8X5 98 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 ATP1B2P14415 290 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■■■□□ 16.5
SHMT2-202ENST00000414700 PPARGP37231 505 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 CTSCP53634 463 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 CLDN2P57739 230 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 OCRLQ01968 901 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 TMEM115Q12893 351 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 DLG1Q12959 904 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PTRHD1Q6GMV3 140 aaKnown RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 TRIM69Q86WT6 500 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 RASGEF1AQ8N9B8 481 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SIDT2Q8NBJ9 832 aaKnown RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SLC7A6OSQ96CW6 309 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 APOPT1Q96IL0 206 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 GPAMQ9HCL2 828 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SARS2Q9NP81 518 aaKnown RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SLC17A7Q9P2U7 560 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PCYT1BQ9Y5K3 369 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 H0Y3Z8 333 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 LATO43561 262 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 ZNF217O75362 1048 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 TRIM16O95361 564 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 WISP3O95389 354 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 CHRM3P20309 590 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 CDK3Q00526 305 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 IL9RQ01113 521 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 LDLRAP1Q5SW96 308 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 FOXB2Q5VYV0 432 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PAQR3Q6TCH7 311 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 CAMKK1Q8N5S9 505 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 DEFB119Q8N690 84 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 KCTD4Q8WVF5 259 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 BIRC7Q96CA5 298 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 C1QTNF1Q9BXJ1 281 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 DENND2DQ9H6A0 471 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-202ENST00000414700 GNPTGQ9UJJ9 305 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PCDHB1Q9Y5F3 818 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 SLCO1B1Q9Y6L6 691 aa15.29■□□□□ 0.04
SHMT2-202ENST00000414700 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 TMEM221A6NGB7 291 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 M0R296 226 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 COPEO14579 308 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 HNRNPCL1O60812 293 aaKnown RBP15.28■□□□□ 0.04
SHMT2-202ENST00000414700 MSH3P20585 1137 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 TRIM23P36406 574 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 RANBP1P43487 201 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 CCR3P51677 355 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 CLCN7P51798 805 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 RCN2Q14257 317 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 C16orf46Q6P387 395 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms