RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 BEST2Q8NFU1 509 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TFAP2BQ92481 460 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 NXPE3Q969Y0 559 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 EFHD2Q96C19 240 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 MRPL1Q9BYD6 325 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 RGS18Q9NS28 235 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 IGSF9Q9P2J2 1179 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 BCAP29Q9UHQ4 241 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TBX21Q9UL17 535 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TMPRSS11EQ9UL52 423 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 DNPEPQ9ULA0 475 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 PSMD13Q9UNM6 376 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 HBS1LQ9Y450 684 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TNRC18O15417 2968 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TMEM247A6NEH6 219 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 H3BNX3 289 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 DNAJA2O60884 412 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 XYLBO75191 536 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 KLHL18O94889 574 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SCAF4O95104 1147 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 UNGP13051 313 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 KCNE1P15382 129 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SSTR1P30872 391 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SLC5A2P31639 672 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 GRK5P34947 590 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 IDH3AP50213 366 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 CDK9P50750 372 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 AQP5P55064 265 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 ABATP80404 500 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 GSTM4Q03013 218 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 LMAN2Q12907 356 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 VEPH1Q14D04 833 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 FSCBQ5H9T9 825 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 ERICH5Q6P6B1 374 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 ZNF598Q86UK7 904 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 URGCPQ8TCY9 931 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 DCUN1D1Q96GG9 259 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 ABHD8Q96I13 439 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 KLF6Q99612 283 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TEX12Q9BXU0 123 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 FRMD8P1Q9BZ68 369 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 DPEP3Q9H4B8 488 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 CCDC86Q9H6F5 360 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 PFDN4Q9NQP4 134 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SLC35C2Q9NQQ7 365 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 GPN3Q9UHW5 284 aaPredicted RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 UBQLN1Q9UMX0 589 aaKnown RBP9.29□□□□□ -0.92
SNHG3-201ENST00000413987 TANC1Q9C0D5 1861 aa9.29□□□□□ -0.92
SNHG3-201ENST00000413987 SDR42E2A6NKP2 422 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 GMFGO60234 142 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 RPLP2P05387 115 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ZSCAN5DPP0CG00 497 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CDH2P19022 906 aaPredicted RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PTPN7P35236 360 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 GAS6Q14393 721 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SOWAHAQ2M3V2 549 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 Q3ZCU0 254 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SH2D5Q6ZV89 423 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 BBS12Q6ZW61 710 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SLC24A5Q71RS6 500 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 RHOUQ7L0Q8 258 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 C16orf59Q7L2K0 433 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 KBTBD6Q86V97 674 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PDIK1LQ8N165 341 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SFRP1Q8N474 314 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 FBXO36Q8NEA4 188 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ADCY4Q8NFM4 1077 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SLC44A1Q8WWI5 657 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CPA5Q8WXQ8 436 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 FOXJ1Q92949 421 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PEX13Q92968 403 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 MR1Q95460 341 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CMTM5Q96DZ9 223 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 KCNK16Q96T55 309 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 EDEM2Q9BV94 578 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ELOVL4Q9GZR5 314 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PCED1AQ9H1Q7 454 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ADNPQ9H2P0 1102 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 C12orf65Q9H3J6 166 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SEPSECSQ9HD40 501 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CDH22Q9UJ99 828 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 DLGAP4Q9Y2H0 992 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CEPT1Q9Y6K0 416 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SF3B1O75533 1304 aaKnown RBP eCLIP9.28□□□□□ -0.924e-6■■■■□ 26
SNHG3-201ENST00000413987 CCDC162PA2VCL2 907 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PIRO00625 290 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 DVL2O14641 736 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 NCF1P14598 390 aaPredicted RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CD19P15391 556 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms