RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TCEA1P23193 301 aaKnown RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SP100P23497 879 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 ITGB8P26012 769 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 AMPHP49418 695 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 PCYT1AP49585 367 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 CRYZQ08257 329 aaKnown RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 TROAPQ12815 778 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 NR1D2Q14995 579 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 TDRD12Q587J7 1177 aaKnown RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 EFHC1Q5JVL4 640 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 C11orf88Q6PI97 169 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 CCNI2Q6ZMN8 369 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SPATA19Q7Z5L4 167 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 MAGEC3Q8TD91 643 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 AFAP1L1Q8TED9 768 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLC38A5Q8WUX1 472 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 ROBO4Q8WZ75 1007 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SEMA4DQ92854 862 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 MR1Q95460 341 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLAMF9Q96A28 289 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SPSB1Q96BD6 273 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 ZNF582Q96NG8 517 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR1F2PQ96R84 312 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLC22A12Q96S37 553 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMEM79Q9BSE2 394 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 KATNB1Q9BVA0 655 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 WNT5BQ9H1J7 359 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 C2orf40Q9H1Z8 148 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 LRMDAQ9H2I8 198 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 HHATLQ9HCP6 504 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 OSER1Q9NX31 292 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 DDX43Q9NXZ2 648 aaKnown RBP4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 DPP3Q9NY33 737 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 C1RLQ9NZP8 487 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 STK26Q9P289 416 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 KLHL9Q9P2J3 617 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 C11orf21Q9P2W6 132 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 RNF150Q9ULK6 438 aa4.64□□□□□ -1.67
HMGB3P31-201ENST00000413333 A0A0U1RQJ8 604 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR2M5A3KFT3 312 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PI4K2BG5E9Z4 385 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMEM178BH3BS89 294 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 KCNJ13O60928 360 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GBAP04062 536 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 IGHV4-30-4P0DP06 118 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 CYP11B2P19099 503 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 CRKLP46109 303 aaKnown RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 KCNJ4P48050 445 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 INHBEP58166 350 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 ISL1P61371 349 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 YWHAHQ04917 246 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 DSC1Q08554 894 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE2BQ13066 116 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PPP2R5CQ13362 524 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLMAPQ14BN4 828 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 OASLQ15646 514 aaKnown RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE2EQ4V326 116 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 NHSL2Q5HYW2 709 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GCNT6Q5T4J0 391 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE2AQ6NT46 116 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 C11orf57Q6ZUT1 292 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PIWIL3Q7Z3Z3 882 aaKnown RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 SPATA21Q7Z572 469 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GLCCI1Q86VQ1 547 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 MSANTD4Q8NCY6 345 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR52I2Q8NH67 350 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 EXT2Q93063 718 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 EXOC4Q96A65 974 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 SFXN2Q96NB2 322 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 INTS14Q96SY0 518 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 EGFL8Q99944 293 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 MMADHCQ9H3L0 296 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLA2Q9H6Q3 261 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PCDH9Q9HC56 1237 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE2DQ9UEU5 116 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 CPSF3Q9UKF6 684 aaKnown RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 KCNS2Q9ULS6 477 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 MYO6Q9UM54 1294 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PADI2Q9Y2J8 665 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 KCNK7Q9Y2U2 307 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 SNX5Q9Y5X3 404 aa4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 PDS5AQ29RF7 1337 aaKnown RBP4.63□□□□□ -1.67
HMGB3P31-201ENST00000413333 A0A0U1RQK1 487 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 A0A1W2PP11 408 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 ZNF320A2RRD8 509 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 CLIC2O15247 247 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 RFPL2O75678 378 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE7O76087 117 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 KDM4BO94953 1096 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 BMP10O95393 424 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE12FP0CL80 117 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE12GP0CL81 117 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE12IP0CL82 117 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 S1PR1P21453 382 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 EEF1B2P24534 225 aaKnown RBP4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 CDC25AP30304 524 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMPOP42166 694 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms