RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 A0A1W2PPM1 405 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 KLHL33A6NCF5 533 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 URADA6NGE7 173 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ISM1B1AKI9 464 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 K7ERQ8 282 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 LAMTOR5O43504 91 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A9O60656 530 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 WDR47O94967 919 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 S100A6P06703 90 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 POU2F2P09086 479 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A6P19224 532 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A1P22309 533 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A4P22310 534 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A3P35503 534 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A5P35504 534 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HNF1BP35680 557 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HMGCLP35914 325 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HSD17B2P37059 387 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SLC26A3P40879 764 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 SERPINB10P48595 397 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 STC1P52823 247 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ACSM2AQ08AH3 577 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 GALNTL6Q49A17 601 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ACSM2BQ68CK6 577 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 GALNT18Q6P9A2 607 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 RANBP10Q6VN20 620 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CNTD1Q8N815 330 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 KLK6Q92876 244 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 CNDP1Q96KN2 507 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 AGAP2Q99490 1192 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 HERPUD2Q9BSE4 406 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 ABCG8Q9H221 673 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A7Q9HAW7 530 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A10Q9HAW8 530 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 UGT1A8Q9HAW9 530 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 IL21Q9HBE4 155 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 TMEM30AQ9NV96 361 aa8.42□□□□□ -1.06
SYNE1-211ENST00000413186 GFRA2O00451 464 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 FCHO1O14526 889 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TRAFD1O14545 582 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 HOXC11O43248 304 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SGTAO43765 313 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KRR1Q13601 381 aaKnown RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 MPP2Q14168 576 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF234Q14588 700 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ZNF77Q15935 545 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KIAA1161Q6NSJ0 714 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 GPRIN3Q6ZVF9 776 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 Q6ZVL8 140 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 C17orf64Q86WR6 236 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 NXPE1Q8N323 547 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KIF2BQ8N4N8 673 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TRAM1L1Q8N609 369 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TTC29Q8NA56 475 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KDM1BQ8NB78 822 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SELENOMQ8WWX9 145 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 DNASE1L2Q92874 299 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 FAM83CQ9BQN1 747 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SEMA4BQ9NPR2 832 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SUSD2Q9UGT4 822 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 RAP2CQ9Y3L5 183 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 A0A1W2PP55 124 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 STK16O75716 305 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CBSLP0DN79 551 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ATP1B2P14415 290 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CBSP35520 551 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 RPIAP49247 311 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SEMG2Q02383 582 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 PCBD2Q9H0N5 130 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KLQ9UEF7 1012 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 HS3ST2Q9Y278 367 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 PSMD11O00231 422 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 PSMD12O00232 456 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ULK1O75385 1050 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 IGLV3-27P01718 113 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 BPGMP07738 259 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 HLA-FP30511 346 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 GKP32189 559 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 NUDT1P36639 197 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 DHPSP49366 369 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 MED21Q13503 144 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CYLC2Q14093 348 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 INAVAQ3KP66 663 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 SULT1C3Q6IMI6 304 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ENPP7Q6UWV6 458 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CHST15Q7LFX5 561 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TMIEQ8NEW7 156 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 CCM2Q9BSQ5 444 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 DNAJC11Q9NVH1 559 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 A0A1W2PPC1 479 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 KMOO15229 486 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 FAM155BO75949 473 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 RECQL5O94762 991 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 BMP10O95393 424 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 MT-CO1P00395 513 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ANXA6P08133 673 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 PCSK2P16519 638 aa8.41□□□□□ -1.06
SYNE1-211ENST00000413186 ARRB1P49407 418 aaPredicted RBP8.41□□□□□ -1.06
SYNE1-211ENST00000413186 TP53BP2Q13625 1128 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms