RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NPPAP01160 153 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 FABP3P05413 133 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 LHX1P48742 406 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC10A6Q3KNW5 377 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 BLOC1S3Q6QNY0 202 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 ITCHQ96J02 903 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 GPR63Q9BZJ6 419 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 CLPBQ9H078 707 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 A0A1B0GW55 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 PCP4L1A6NKN8 68 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 HAT1O14929 419 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 RECQL4O94761 1208 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L2P0CJ85 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L3P0CJ86 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L4P0CJ87 422 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L5P0CJ88 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L6P0CJ89 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4L7P0CJ90 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 ARRB2P32121 409 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 OR4D2P58180 307 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 ANGPT1Q15389 498 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 COQ5Q5HYK3 327 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DIRAS2Q96HU8 199 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 RPL10LQ96L21 214 aaKnown RBP13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DUX4Q9UBX2 424 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 C1RP00736 705 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 BMP4P12644 408 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 CHRNA4P43681 627 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 ARHGEF7Q14155 803 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 CASP12Q6UXS9 341 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 OR4L1Q8NH43 312 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC38A4Q969I6 547 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 PCDHGA8Q9Y5G5 932 aa13.73□□□□□ -0.21
CLTCL1-201ENST00000412649 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 hCG_2039718K7EN88 272 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC28A1O00337 649 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 RFXANKO14593 260 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC7A4O43246 635 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 HTR1BP28222 390 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 INCA1Q0VD86 236 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 CLEC14AQ86T13 490 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 ZZZ3Q8IYH5 903 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 UBE2J2Q8N2K1 259 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 C2CD4AQ8NCU7 369 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 FCRL5Q96RD9 977 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 LPIN3Q9BQK8 851 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 FZD8Q9H461 694 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 ZNF224Q9NZL3 707 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 MAST2Q6P0Q8 1798 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 PIPSLA2A3N6 862 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 ACOX3O15254 700 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 GUCY1B2O75343 617 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 CHRNB1P11230 501 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 JUNBP17275 347 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 TWF1Q12792 350 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 FAM174BQ3ZCQ3 159 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 NOL9Q5SY16 702 aaKnown RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 SZRD1Q7Z422 152 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 SMARCD1Q96GM5 515 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 TBATAQ96M53 351 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 DEFB129Q9H1M3 183 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 PTGDR2Q9Y5Y4 395 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 LYVE1Q9Y5Y7 322 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 AGXTP21549 392 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 BDNFP23560 247 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 PSMA1P25786 263 aaKnown RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 DGKQP52824 942 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 STARD3Q14849 445 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 TTLL9Q3SXZ7 439 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 RHOXF1Q8NHV9 184 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 VPS35Q96QK1 796 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 UXTQ9UBK9 157 aaPredicted RBP13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 GRIP1Q9Y3R0 1128 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 PCDHGA3Q9Y5H0 932 aa13.72□□□□□ -0.21
CLTCL1-201ENST00000412649 IFNA14P01570 189 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 PIRTP0C851 137 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 SHMT2P34897 504 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 MBTD1Q05BQ5 628 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 PNCKQ6P2M8 343 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 SLCO4A1Q96BD0 722 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 ZNF641Q96N77 438 aaPredicted RBP13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 MLPHQ9BV36 600 aaPredicted RBP13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 INTS7Q9NVH2 962 aaKnown RBP13.71□□□□□ -0.21
CLTCL1-201ENST00000412649 CD300AQ9UGN4 299 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms